| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314373
Identifier: 158314373
GI number: 158314373
Start: 3025087
End: 3025488
Strand: Direct
Name: 158314373
Synonym: Franean1_2545
Alternate gene names: NA
Gene position: 3025087-3025488 (Clockwise)
Preceding gene: 158314372
Following gene: 158314374
Centisome position: 33.68
GC content: 71.64
Gene sequence:
>402_bases ATGAGCCCGACGCGACCGCGCCCAGTGGCCCGTCCCGCCCGTTCCCGCACGGCCGGCCGGCGCGCGGTGGTGCGCCGGGC GGCCTTGCTCTCCGCGGTCGTGCTGGTGCTCGTCCTCGCCGGCAGCGTCACGGCCTTCGCCCAAGTGCCCGACCCCGGGG TGCCGGTGGCACCGGATCTGAACACGGTCCTGAACAACATCCGCAACTGGATCATGGGGAGCCTGGCGTTGCTGGCGACG GTGTTCCTCTCGATCGGCGGCGTGCGCTACGTGATCGCCAACGGGGAGCCGGGCGAGGTCGGCAAGGCGAAAGACTCCTT CCGTAACGCCGGCTACGGCTATGGGCTCGCCGCGCTCGCGCCGGTCGTCGTCGAGGTCCTCAAGCAGATCGTCGGGGGCT AG
Upstream 100 bases:
>100_bases CCAGCCGCGCCCCGCGCTCGCCGGCCGGCGAGCCCCCGCACCGGCCCCACCCACCGGGCGCGGTCGGTGTCCCGGCGCTG GCGGTCGCGGGGGTGCAGGC
Downstream 100 bases:
>100_bases GCCGTGACCGCCGCCGTCCCCGCACGCCGCATCCTCCCGTCGGGTACGCCAGGTTCTCTGCCCGCCCAGGCGCGCCGCTG GCCGGGCCTGCCTCGGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDLNTVLNNIRNWIMGSLALLAT VFLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALAPVVVEVLKQIVGG
Sequences:
>Translated_133_residues MSPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDLNTVLNNIRNWIMGSLALLAT VFLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALAPVVVEVLKQIVGG >Mature_132_residues SPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDLNTVLNNIRNWIMGSLALLATV FLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALAPVVVEVLKQIVGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13797; Mature: 13666
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCH NTVLNNIRNWIMGSLALLATVFLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALA HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHH PVVVEVLKQIVGG HHHHHHHHHHHCC >Mature Secondary Structure SPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCH NTVLNNIRNWIMGSLALLATVFLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALA HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHH PVVVEVLKQIVGG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA