Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314354

Identifier: 158314354

GI number: 158314354

Start: 3004549

End: 3004767

Strand: Direct

Name: 158314354

Synonym: Franean1_2525

Alternate gene names: NA

Gene position: 3004549-3004767 (Clockwise)

Preceding gene: 158314352

Following gene: 158314358

Centisome position: 33.45

GC content: 69.41

Gene sequence:

>219_bases
TTGGTGTACCACGGGCGCGGCGCCGGCGCAGGGTGGCCACCGATGCACCCTCTGAACCGGGTCACGTCCATGGGTGTGAC
CAAGGAGGTGTTCGCCGGCCGCTTCATCTGGGTTGAGGCCGGCGTGATGGACCCGAGTGGAGGAGGGCCATTCCTCGCCG
CGGAGCGGCAGAAGGCAGCCCCGGCACGACCGGCCGTCGACGTTTTCGCCGCAGGCTAA

Upstream 100 bases:

>100_bases
GCGGTCGCGCTGCCCGTCCTCGTCGGTGTCGGTGGCGACATCGCACATCCCCCCTCGGGGAACCTCTCCGTGTTACGACC
CCTCGTAAACGGTGACAGGT

Downstream 100 bases:

>100_bases
CCACTCGTCGGCGCTCGGTGCCGAAGGCAGGCCGGTAGGACGCCGGGAAAACGCCGAAATTTCGAGCGGAGGGTCACGTC
CGGAGGCGCAGCCGCGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MVYHGRGAGAGWPPMHPLNRVTSMGVTKEVFAGRFIWVEAGVMDPSGGGPFLAAERQKAAPARPAVDVFAAG

Sequences:

>Translated_72_residues
MVYHGRGAGAGWPPMHPLNRVTSMGVTKEVFAGRFIWVEAGVMDPSGGGPFLAAERQKAAPARPAVDVFAAG
>Mature_72_residues
MVYHGRGAGAGWPPMHPLNRVTSMGVTKEVFAGRFIWVEAGVMDPSGGGPFLAAERQKAAPARPAVDVFAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7508; Mature: 7508

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYHGRGAGAGWPPMHPLNRVTSMGVTKEVFAGRFIWVEAGVMDPSGGGPFLAAERQKAA
CEECCCCCCCCCCCCCCHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCCCEEECCCCCCC
PARPAVDVFAAG
CCCCCEEEEECC
>Mature Secondary Structure
MVYHGRGAGAGWPPMHPLNRVTSMGVTKEVFAGRFIWVEAGVMDPSGGGPFLAAERQKAA
CEECCCCCCCCCCCCCCHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCCCEEECCCCCCC
PARPAVDVFAAG
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA