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The map label for this gene is dppC [H]

Identifier: 158314342

GI number: 158314342

Start: 2991152

End: 2992105

Strand: Direct

Name: dppC [H]

Synonym: Franean1_2512

Alternate gene names: 158314342

Gene position: 2991152-2992105 (Clockwise)

Preceding gene: 158314341

Following gene: 158314343

Centisome position: 33.3

GC content: 72.64

Gene sequence:

>954_bases
ATGACGCGGAAGGCAGCGGGCCCGTTGCGGCGGGCCGTGCGGCTGCGGTCCACGAAGATCGCCCTGGTGATCCTCGGTGT
GGTCGCCGTACTCGGGTTCGTCGGCGGGACGCTGGCGCCGTCCGACCCGCTCGCCCAGGACACCTCCAACCTGCTGGCCG
GCCCGAGCGGCGCGCACTGGCTCGGCACCGACTACCTCGGGCGGGATGTGCTCAGCCGGCTGATGGACGCCACCGGCCGA
TCGGTGGTCGGCGCCGTGGAAGCGGTCGCGGTGGCGTTCCTGCTCGGTGTTCCGTCGGGGCTGGGCTCGGTCGTCTTCGG
CCGGGTCTTCGAATGGGTGGCGCAGCGCTTGGTGGACGCGGTGATGACCCTGCCCTACATCATCTTCGCGATCGCCGTGA
CCGGGATCATCGGTAACGGCCGCGACCAGGCGATGCTCGCCATCGGGGTGCTGCTGGCACCGCTGTTCTTCCGGGTCACC
CGGGCGGCGGCGCTCGGCTTCACCCGGGCGCAGTACGTCGAGGTCGCCGAGCTGCTCGGCGCGTCCCGTGGCTGGATCAT
CCGGACCCACATCTGGTCGAAGGTGCTCCCGACGGTCGCGGTCACCACCGCGCAGCTGTCCGCGGCCGCGCTGCTGGCCG
TGTCCTCGCTGTCGTTCCTCGGTATCGGGGTGAAGCCGCCGGCCCCGACCTGGGGCGGGATGCTCTCCAGCGACCTGGGC
TTCCTGGCCCAGCAGCCGTGGGCACCGGCGATCCCGGCGCTCGCCATCATGCTGACCGCCGGCTCGCTGAACGCCATCGC
CGACGCGATCCGGGACACCACGGGAATCGCGGTGGATCCGATCGGTCGCGGCGCGCCCCGTCCGGAGGCCGTGCCGGCTG
TCCCGGGGGCTCCGGCCGTCCCGGGAGCGCCGGCCGTGGTCGTCCCCGAGCAGGAGGAGAGGATCCATGCCTGA

Upstream 100 bases:

>100_bases
AGGGCGTGCTGGTCACCATGATCGGGCTCGTCGTGGTCTGCAACCTCCTGGTGAACGCCGCGCTGCTGCGCCTGACACCG
CACGCGAAGAGGCAGGAACA

Downstream 100 bases:

>100_bases
GCCGGGAACCGGCCGGGGGGACCCGCTGCTGACGGTCGACGGCGTTCGGGTCGCCATCGGCGGCGGGCGGACCGAGGCCG
TCCACGGCGTGTCGTTCGAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MTRKAAGPLRRAVRLRSTKIALVILGVVAVLGFVGGTLAPSDPLAQDTSNLLAGPSGAHWLGTDYLGRDVLSRLMDATGR
SVVGAVEAVAVAFLLGVPSGLGSVVFGRVFEWVAQRLVDAVMTLPYIIFAIAVTGIIGNGRDQAMLAIGVLLAPLFFRVT
RAAALGFTRAQYVEVAELLGASRGWIIRTHIWSKVLPTVAVTTAQLSAAALLAVSSLSFLGIGVKPPAPTWGGMLSSDLG
FLAQQPWAPAIPALAIMLTAGSLNAIADAIRDTTGIAVDPIGRGAPRPEAVPAVPGAPAVPGAPAVVVPEQEERIHA

Sequences:

>Translated_317_residues
MTRKAAGPLRRAVRLRSTKIALVILGVVAVLGFVGGTLAPSDPLAQDTSNLLAGPSGAHWLGTDYLGRDVLSRLMDATGR
SVVGAVEAVAVAFLLGVPSGLGSVVFGRVFEWVAQRLVDAVMTLPYIIFAIAVTGIIGNGRDQAMLAIGVLLAPLFFRVT
RAAALGFTRAQYVEVAELLGASRGWIIRTHIWSKVLPTVAVTTAQLSAAALLAVSSLSFLGIGVKPPAPTWGGMLSSDLG
FLAQQPWAPAIPALAIMLTAGSLNAIADAIRDTTGIAVDPIGRGAPRPEAVPAVPGAPAVPGAPAVVVPEQEERIHA
>Mature_316_residues
TRKAAGPLRRAVRLRSTKIALVILGVVAVLGFVGGTLAPSDPLAQDTSNLLAGPSGAHWLGTDYLGRDVLSRLMDATGRS
VVGAVEAVAVAFLLGVPSGLGSVVFGRVFEWVAQRLVDAVMTLPYIIFAIAVTGIIGNGRDQAMLAIGVLLAPLFFRVTR
AAALGFTRAQYVEVAELLGASRGWIIRTHIWSKVLPTVAVTTAQLSAAALLAVSSLSFLGIGVKPPAPTWGGMLSSDLGF
LAQQPWAPAIPALAIMLTAGSLNAIADAIRDTTGIAVDPIGRGAPRPEAVPAVPGAPAVPGAPAVVVPEQEERIHA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=235, Percent_Identity=34.468085106383, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1787054, Length=277, Percent_Identity=31.0469314079422, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1789889, Length=235, Percent_Identity=31.9148936170213, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1789964, Length=249, Percent_Identity=35.3413654618474, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1787549, Length=283, Percent_Identity=29.6819787985866, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787498, Length=276, Percent_Identity=28.9855072463768, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788505, Length=231, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32617; Mature: 32485

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCEEEECCHHHHCCC
>Mature Secondary Structure 
TRKAAGPLRRAVRLRSTKIALVILGVVAVLGFVGGTLAPSDPLAQDTSNLLAGPSGAHW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCC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CCCCEEEECCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]