| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314274
Identifier: 158314274
GI number: 158314274
Start: 2904462
End: 2904773
Strand: Direct
Name: 158314274
Synonym: Franean1_2444
Alternate gene names: NA
Gene position: 2904462-2904773 (Clockwise)
Preceding gene: 158314271
Following gene: 158314276
Centisome position: 32.34
GC content: 69.23
Gene sequence:
>312_bases ATGAGCCAGCAGGAGCAGCAGCAGCAGCGCCAGCAGGTGGAGCAGCAGCTCCGTCAGAACTGGCGGCAGCTCCGCTACCG CCTCCTTGACCAGTTCGGTCAGGTCAGCGCGGCGGATCTCGACTCCGCGACCGACATCAATGACCTCGTCGCCCGGATCG CGGACAAGACGCACCACAGCGAGCGTTACGTCGAGAACCGCCTGCGTGAGCTGGCCGGTGTCGGCGGCGGCCAGGGTCAG GCCGGCGAGCGCTTCGGTGGCGGCCAGCAGGGCCAGCAGGGCAACCAGGGCCAGCAGGGTTTCGGCGCCTAG
Upstream 100 bases:
>100_bases ATTCCGGCGTGGGTTTGACGCTGCCCGAAGTCGCTGGGGTAGCGTTCGCCCCGCACCTCGGTGCGCGCCAGTAAATGACC ACTGAGAAAGGGATCAGAAA
Downstream 100 bases:
>100_bases TAACACCCTCCTGCTGACCGGCCAGGCCGGAATGTCGGCGCACCACAGTTGAACAATGCGTCCAGCGGTGCGCCGCCAAG CCCTCCGACGCTACTCGGCA
Product: PE-PGRS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSQQEQQQQRQQVEQQLRQNWRQLRYRLLDQFGQVSAADLDSATDINDLVARIADKTHHSERYVENRLRELAGVGGGQGQ AGERFGGGQQGQQGNQGQQGFGA
Sequences:
>Translated_103_residues MSQQEQQQQRQQVEQQLRQNWRQLRYRLLDQFGQVSAADLDSATDINDLVARIADKTHHSERYVENRLRELAGVGGGQGQ AGERFGGGQQGQQGNQGQQGFGA >Mature_102_residues SQQEQQQQRQQVEQQLRQNWRQLRYRLLDQFGQVSAADLDSATDINDLVARIADKTHHSERYVENRLRELAGVGGGQGQA GERFGGGQQGQQGNQGQQGFGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11539; Mature: 11407
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQEQQQQRQQVEQQLRQNWRQLRYRLLDQFGQVSAADLDSATDINDLVARIADKTHHS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHH ERYVENRLRELAGVGGGQGQAGERFGGGQQGQQGNQGQQGFGA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQQEQQQQRQQVEQQLRQNWRQLRYRLLDQFGQVSAADLDSATDINDLVARIADKTHHS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHH ERYVENRLRELAGVGGGQGQAGERFGGGQQGQQGNQGQQGFGA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA