| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314268
Identifier: 158314268
GI number: 158314268
Start: 2900347
End: 2900940
Strand: Direct
Name: 158314268
Synonym: Franean1_2438
Alternate gene names: NA
Gene position: 2900347-2900940 (Clockwise)
Preceding gene: 158314267
Following gene: 158314269
Centisome position: 32.29
GC content: 75.93
Gene sequence:
>594_bases ATGACGCCCTCGACAACGATCAGCCCCCCGCTCGCGGACTACGACGCCGTCCCGGGTGACGACCTCCTCGCCGAGCCGGT CCGGGTGGCCGTCGCGATACTCATGGGGCGGGGCGAGAGCCGCGAGCCCTACGAGTGGCTCGCCCGGCGGCTGGCGCTCG ACGGTTACGCCGCCGCGGTCGTTCCCGCCGGCGGGAACGTGGCGCACGCCGTCGGCGAGGTGCGCCGCCCCGGACTCCCC TTCGTCCTCCTCGGCTCGGACTCGGGCGCGCTGGCCGCGCTGGCGATGGCCGGCTCACCCGCCGTGCGCCCCGACGGGCT TGTCCTGCTCGGGCTGCCGCTGCTGCACGTGCCGGTCGCCGGCATACCTGTCGGCGACCCGCCGCCGCGGGTGCTGCCCG ATCTCCCCATCCTGCTCATCCACGGCCGGGACGACCCGATCAGCCCGTTGCAGCTGGTGCGGATGACCACCCGGACGGCC GCCCGGACCGAGCTGACCGTGGTCCCCGGTGGGCACGCCGTGCTGGCGGGGCCGGGCCGGCGCAGTGTCCCGGCCCGGGT GCTGCTCTTCCTCGAGGACCTGATCGCCGGCTGA
Upstream 100 bases:
>100_bases GGGCCGCGGCGCCGGTGACGCCGGCGGCACGAGCCTCGCGTATCCCCCGCCGCGGGCCGTGACGGCGCAACGGAGCGCCA GAGAAGGAGACCACGGCGCC
Downstream 100 bases:
>100_bases GGCCCGCCGCCCGGCGGGCGCCATGTGGCTGTGTCGACCGTTCGGGCTGTGTTGATTGTTCAGGCTCGACTGACGTCAGT GGTCGCTGTACTGTTCAGTC
Product: putative non-heme haloperoxidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTPSTTISPPLADYDAVPGDDLLAEPVRVAVAILMGRGESREPYEWLARRLALDGYAAAVVPAGGNVAHAVGEVRRPGLP FVLLGSDSGALAALAMAGSPAVRPDGLVLLGLPLLHVPVAGIPVGDPPPRVLPDLPILLIHGRDDPISPLQLVRMTTRTA ARTELTVVPGGHAVLAGPGRRSVPARVLLFLEDLIAG
Sequences:
>Translated_197_residues MTPSTTISPPLADYDAVPGDDLLAEPVRVAVAILMGRGESREPYEWLARRLALDGYAAAVVPAGGNVAHAVGEVRRPGLP FVLLGSDSGALAALAMAGSPAVRPDGLVLLGLPLLHVPVAGIPVGDPPPRVLPDLPILLIHGRDDPISPLQLVRMTTRTA ARTELTVVPGGHAVLAGPGRRSVPARVLLFLEDLIAG >Mature_196_residues TPSTTISPPLADYDAVPGDDLLAEPVRVAVAILMGRGESREPYEWLARRLALDGYAAAVVPAGGNVAHAVGEVRRPGLPF VLLGSDSGALAALAMAGSPAVRPDGLVLLGLPLLHVPVAGIPVGDPPPRVLPDLPILLIHGRDDPISPLQLVRMTTRTAA RTELTVVPGGHAVLAGPGRRSVPARVLLFLEDLIAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20338; Mature: 20207
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSTTISPPLADYDAVPGDDLLAEPVRVAVAILMGRGESREPYEWLARRLALDGYAAAV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE VPAGGNVAHAVGEVRRPGLPFVLLGSDSGALAALAMAGSPAVRPDGLVLLGLPLLHVPVA EECCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCHHHHCCCC GIPVGDPPPRVLPDLPILLIHGRDDPISPLQLVRMTTRTAARTELTVVPGGHAVLAGPGR CCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEECCCC RSVPARVLLFLEDLIAG CCCHHHHHHHHHHHHCC >Mature Secondary Structure TPSTTISPPLADYDAVPGDDLLAEPVRVAVAILMGRGESREPYEWLARRLALDGYAAAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE VPAGGNVAHAVGEVRRPGLPFVLLGSDSGALAALAMAGSPAVRPDGLVLLGLPLLHVPVA EECCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCHHHHCCCC GIPVGDPPPRVLPDLPILLIHGRDDPISPLQLVRMTTRTAARTELTVVPGGHAVLAGPGR CCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEECCCC RSVPARVLLFLEDLIAG CCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA