| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is mer [H]
Identifier: 158314177
GI number: 158314177
Start: 2794641
End: 2795555
Strand: Direct
Name: mer [H]
Synonym: Franean1_2345
Alternate gene names: 158314177
Gene position: 2794641-2795555 (Clockwise)
Preceding gene: 158314174
Following gene: 158314178
Centisome position: 31.11
GC content: 74.21
Gene sequence:
>915_bases ATGCGGTTGGGTGTTTACGTGGGCGGGGCCGGCTCCACCCTGGAGGAGATGATCGGGCAGGCGCGCGCGGCTGCCGAAGC CGGCCTCGACAGCGCCTTCTTCAGCCAGATCACCGCGTGGGACGCGCTCACCGTCGCCGCGCTCGCGGGGCAGCGGGTGC CGGGCATCGAGCTCGGCACCGCCGTCGTCCAGACCTATCCCCGCCATCCGCTCGTGCTCGCCGGGCAGGCGCTCACCGCC CAGGCGGCGACCGGTCACCGGGTCACCCTCGGGGTCGGGCCGAGCCACCGGCACTTCATCGAGGGCGCCTTCGGCCACTC CTACGACCAACCGGCGCGGCACACCCGGGAGTACCTCTCCGTGCTGGGCCCGCTGCTGCGCGGGGAGCCCGTCGAGCATC GCGGATCCTTCCTGACCGCGGCCGGGCAGGTCGAGGTGCCCGGTGCCACCGCCGTCCCGGTGCTGCTGGCCGCGCTTGGC CCGGTCATGCTGCGTGTCGCCGGCGAGCTCGCCGACGGGACGGTGACGGTGTGGGCCGGTCCCGAGGCCCTCGCCGGGCA TGTCGTGCCGACGATCACACGCGCCGCCGCGGCGGCGGGACGGCCCGCCCCGCGGATCGTGGCCGGCGTCCCGATCAGCA TCACCGCCGATCCGGAAGGGGCGCGGCAGACGGTCGAGGCACAGGTGGGCTTCGCCGCCAGTTTCCCGGCCTACCGCACG ATCCTGGCGCGGGACGGCAGGTCGGCCGTGGGGGAGACGGTCATCGCGGGAGATGAGGCGACCGTCGCGTCGTCGATCCG GCAGTTCGCCGACGCCGGGGTGACCGATCTGCTGGTCAGTCTCGTCGGCGGCACTGAAGATCGACGGCGGACCCTGCAGT GGCTCGGACGGTGGCGTCAGGCCGACCGGGACTAG
Upstream 100 bases:
>100_bases CGTCGCGCATCGGATCGCACAGTCTGGCTCCCCTGGAATCTGAGCCTTCAGACTACTGTCCAAGGGGAAGCGGAACATCC GATTCATCTTGGAGGCGTCA
Downstream 100 bases:
>100_bases CCGAAGGACCGGGCGGGATCGCCGCCTTCGTCGCTCTCGCCCGGGCCGGTCTCGGCGCCGCCTACCTGAGCCCTGCCTGG GCCGGCCTGGCATTGGCGAT
Product: luciferase family protein
Products: NA
Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGTAVVQTYPRHPLVLAGQALTA QAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLSVLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALG PVMLRVAGELADGTVTVWAGPEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQADRD
Sequences:
>Translated_304_residues MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGTAVVQTYPRHPLVLAGQALTA QAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLSVLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALG PVMLRVAGELADGTVTVWAGPEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQADRD >Mature_304_residues MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGTAVVQTYPRHPLVLAGQALTA QAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLSVLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALG PVMLRVAGELADGTVTVWAGPEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQADRD
Specific function: Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT [H]
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mer family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019946 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.5.99.11 [H]
Molecular weight: Translated: 31496; Mature: 31496
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGT CEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AVVQTYPRHPLVLAGQALTAQAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLS HHHHHCCCCCEEEECCHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHH VLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALGPVMLRVAGELADGTVTVWAG HHHHHHCCCCCHHCCCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC PEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT HHHHHCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCHHHHH ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQ HHHCCCCHHHCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ADRD CCCC >Mature Secondary Structure MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGT CEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AVVQTYPRHPLVLAGQALTAQAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLS HHHHHCCCCCEEEECCHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHH VLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALGPVMLRVAGELADGTVTVWAG HHHHHHCCCCCHHCCCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC PEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT HHHHHCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCHHHHH ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQ HHHCCCCHHHCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ADRD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]