| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314151
Identifier: 158314151
GI number: 158314151
Start: 2768635
End: 2769666
Strand: Direct
Name: 158314151
Synonym: Franean1_2319
Alternate gene names: NA
Gene position: 2768635-2769666 (Clockwise)
Preceding gene: 158314146
Following gene: 158314155
Centisome position: 30.82
GC content: 70.93
Gene sequence:
>1032_bases GTGGCCCGGGGGATTCGTACCTTCTCGGCCATGACTGCTGACACCCTCGTCCGCGACGACCTGTTCACCCATATCCACAA GGCTCTGCGCCTGGGACTTTTCGAGCTCACCGTCCAGGCGGGGGGCCGCACCGACTGGGCGGACCCCGCCGAGGTGGCGG CCCTCGGCGAGCGCTGGCGACCGCTGCTCGCCCTGCTGCGCGCCCACACCGAGCACGAGGACCGCCACATCCTGCGCATC CTCGACGGCGTCGACCCGGAGACCACCGAACCGGCCGGCGAGCAGCATCGCGACCTTGACGACCTGCTCGACGACCTCGC CGACAGGTTCACCGCCGTGCTTGCCGCCCCCGACCCTTCCGCCGGGCTCGACCTCTACCGCGACCTGGCCCGTTTCGTCG CCAGCTATCTTCCCCACCTGCACGGCGAGGAGACCGTCGTCATGGCGCGGGTCTGGGAACTGTGCGGCGACGAGGAAATC GCCCTGACCCGCGCCCGCTTCATGGCCGACACCACCCCGGACGTCATGGCCACGACGCTGGAGTACATGCTCCCCGCCCT GGACCGGCCCACCCGGCACGCCCTGGTCGCCCGCCTGGCGGCCACCGCGCCCCCGCCCGTCCTTACACTTGCCGTGGGCT CCGCGTGCCGGGGCGAGTGTGATCGACACGCCGTCACCGACGATGCAGGCGATGCTGGAGGCGGTGCTCGTCGGTGCCCG GGACGACGCAATCGAGGGCGTCGACGTCGTCGTCCGCCCGGCGCTGGCCGCGACAGCGGTCGACGTGCTCGCCGCGGACG GCTACGTGCTCGGCACCCGGCCAACATCGGCTACATGAGCGGCGCGCTCAAGCACTTCTTCGACCAGAAGCAGCGCGAAC CCTGTGCCGGATGGCTCTGGAGCGCTCAAGGGCGTGCAGAAGATCTTTCTTCGTGTGCCCGGCGGCGCTGTCCCCGGGAT CACTCATGGTGTCAGACCTCGCCGCAAGGGTGGCTGCCGCGGCGTCAGCCGGCCCCCCGCTGTTGGCCATAG
Upstream 100 bases:
>100_bases CCCTCGGCTGCCAGCACCCGGACGCGCTCGCACAGGTTCACGGGTTCCAGCATGACCACGCCGACCCGCCGGGCCAACCC CTCATATCTGGGATAGGCGG
Downstream 100 bases:
>100_bases CGGCGGAACCACCACGAGCGTCCTGGCTGCCTGTCGGGCGCGGACTCCTCCTCCCGCGGGTCCTCCCACCGGATCAGGGC GCCGGCGAGAGGTGCCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MARGIRTFSAMTADTLVRDDLFTHIHKALRLGLFELTVQAGGRTDWADPAEVAALGERWRPLLALLRAHTEHEDRHILRI LDGVDPETTEPAGEQHRDLDDLLDDLADRFTAVLAAPDPSAGLDLYRDLARFVASYLPHLHGEETVVMARVWELCGDEEI ALTRARFMADTTPDVMATTLEYMLPALDRPTRHALVARLAATAPPPVLTLAVGSACRGECDRHAVTDDAGDAGGGARRCP GRRNRGRRRRRPPGAGRDSGRRARRGRLRARHPANIGYMSGALKHFFDQKQREPCAGWLWSAQGRAEDLSSCARRRCPRD HSWCQTSPQGWLPRRQPAPRCWP
Sequences:
>Translated_343_residues MARGIRTFSAMTADTLVRDDLFTHIHKALRLGLFELTVQAGGRTDWADPAEVAALGERWRPLLALLRAHTEHEDRHILRI LDGVDPETTEPAGEQHRDLDDLLDDLADRFTAVLAAPDPSAGLDLYRDLARFVASYLPHLHGEETVVMARVWELCGDEEI ALTRARFMADTTPDVMATTLEYMLPALDRPTRHALVARLAATAPPPVLTLAVGSACRGECDRHAVTDDAGDAGGGARRCP GRRNRGRRRRRPPGAGRDSGRRARRGRLRARHPANIGYMSGALKHFFDQKQREPCAGWLWSAQGRAEDLSSCARRRCPRD HSWCQTSPQGWLPRRQPAPRCWP >Mature_342_residues ARGIRTFSAMTADTLVRDDLFTHIHKALRLGLFELTVQAGGRTDWADPAEVAALGERWRPLLALLRAHTEHEDRHILRIL DGVDPETTEPAGEQHRDLDDLLDDLADRFTAVLAAPDPSAGLDLYRDLARFVASYLPHLHGEETVVMARVWELCGDEEIA LTRARFMADTTPDVMATTLEYMLPALDRPTRHALVARLAATAPPPVLTLAVGSACRGECDRHAVTDDAGDAGGGARRCPG RRNRGRRRRRPPGAGRDSGRRARRGRLRARHPANIGYMSGALKHFFDQKQREPCAGWLWSAQGRAEDLSSCARRRCPRDH SWCQTSPQGWLPRRQPAPRCWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38267; Mature: 38136
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGIRTFSAMTADTLVRDDLFTHIHKALRLGLFELTVQAGGRTDWADPAEVAALGERWR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH PLLALLRAHTEHEDRHILRILDGVDPETTEPAGEQHRDLDDLLDDLADRFTAVLAAPDPS HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCC AGLDLYRDLARFVASYLPHLHGEETVVMARVWELCGDEEIALTRARFMADTTPDVMATTL CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH EYMLPALDRPTRHALVARLAATAPPPVLTLAVGSACRGECDRHAVTDDAGDAGGGARRCP HHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHCCHHHCCCHHCCCCCCCCCCCCCCCCCC GRRNRGRRRRRPPGAGRDSGRRARRGRLRARHPANIGYMSGALKHFFDQKQREPCAGWLW CCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH SAQGRAEDLSSCARRRCPRDHSWCQTSPQGWLPRRQPAPRCWP CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARGIRTFSAMTADTLVRDDLFTHIHKALRLGLFELTVQAGGRTDWADPAEVAALGERWR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH PLLALLRAHTEHEDRHILRILDGVDPETTEPAGEQHRDLDDLLDDLADRFTAVLAAPDPS HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCC AGLDLYRDLARFVASYLPHLHGEETVVMARVWELCGDEEIALTRARFMADTTPDVMATTL CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH EYMLPALDRPTRHALVARLAATAPPPVLTLAVGSACRGECDRHAVTDDAGDAGGGARRCP HHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHCCHHHCCCHHCCCCCCCCCCCCCCCCCC GRRNRGRRRRRPPGAGRDSGRRARRGRLRARHPANIGYMSGALKHFFDQKQREPCAGWLW CCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH SAQGRAEDLSSCARRRCPRDHSWCQTSPQGWLPRRQPAPRCWP CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA