| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314143
Identifier: 158314143
GI number: 158314143
Start: 2760149
End: 2761192
Strand: Direct
Name: 158314143
Synonym: Franean1_2311
Alternate gene names: NA
Gene position: 2760149-2761192 (Clockwise)
Preceding gene: 158314142
Following gene: 158314146
Centisome position: 30.73
GC content: 73.56
Gene sequence:
>1044_bases ATGACGCACGGCGGGATGTACGGCGGCCAGCCCGGCGGGATGCCCCCTGGCGGGTTTCCGCCCGGACCCGGTCCGGGCAT GCCCGGAGGGATGCCTCCGGGTGGGATGCCCCCCGGGGGGATGCCGCCAGGAGGCCCCGGTGGTCCTGGTGGTCCCGGTG GGCCGGCGGGAGGGATCCGCAGCAGCCTGCTCGGCAACCCCGAGGTCACCAGCGGCGAGCGGTTCGCCCTGCAGAACGGC AAGATGCTCAAGGCGACCCTCGGCGCGCAGGGGATGCGTGAGTTCTACGCCCGGCGCGGCGCCATGGTCGCCTACCAGGG CGCCGCGACCTTCGACGCCCACTGGGAGGGCTGGGGCTCCCGGTTCCGCAGCTTCTTCAGCGGCGGCGAGGGCCTGAACC TGATGAACGTCGCCGGCTCCGGCGCGGTCTACCTCGCCAACCAGGCCCAGGACATCCACATCCTCGACCTGGCGGGTGAC GGCCTGACCGTGGACGGCAAGAACGTGCTCGCGTTCGACGCCGGCCTGAACTGGGATCTCGTCCGTGTCGACAGCCAGGT GGGCATCGCCGGCGTCGGCGGTTACCAGATCGAGCTGCGCGGCAACGGCCAGGCCGTCGTGTGCACCTCGGGCGCCCCGC TGGTGATGCGGGTGACCACCCAGAACTACTACTTCGCGGACGCCGACGCCGTCGTCGGCTGGTCGTCGAGCCTGCAGGTC TCGATGCAGGCCGCGGTCACCTCCAGCGCGGCCTGGAAGCCGCGGGGCAACACCGGGGAGAGCTGGCAGCTCCAGTTCTC CGGCGAGGGCTATGTGATCGTCCAGCCCTGCGAGCTGCTGCCGCCCTACAACGCGCTCGCCGGCTCCGGCCTGGCCGGGC AGTTCGGGCTTGGCCAGGGCGGGTTCGCCGGCAACCAGCTCGGCGGGCACGGCGGCGGCCACGGCGGCCACGGCGGGCAC GGCGGGGGCCCGGGCGGGTTCGGCGGCGGCCCCGGTGGGCTCGGCGGCTTCGGCGGACTGTTCGGAAACCAGGGCCGCCA CTGA
Upstream 100 bases:
>100_bases TCTCGGGCCAGGGCTTCGTCGTGGTGCAGCCGAGCGAGGACGAGCGGCCCTCGTTCTCGGTACGCGGCTGATCCGCCGGC GTGGGTGAGAGGATCTGATC
Downstream 100 bases:
>100_bases CCGGACCGGGCTCGCGCCCCCGCCCGGCCCTTGCCCGGTGCCGGCCCGGCTGGTCAGGGCAACTGACTGCTGGGGCGGGG CAGCGTCGGCGTGCGGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTHGGMYGGQPGGMPPGGFPPGPGPGMPGGMPPGGMPPGGMPPGGPGGPGGPGGPAGGIRSSLLGNPEVTSGERFALQNG KMLKATLGAQGMREFYARRGAMVAYQGAATFDAHWEGWGSRFRSFFSGGEGLNLMNVAGSGAVYLANQAQDIHILDLAGD GLTVDGKNVLAFDAGLNWDLVRVDSQVGIAGVGGYQIELRGNGQAVVCTSGAPLVMRVTTQNYYFADADAVVGWSSSLQV SMQAAVTSSAAWKPRGNTGESWQLQFSGEGYVIVQPCELLPPYNALAGSGLAGQFGLGQGGFAGNQLGGHGGGHGGHGGH GGGPGGFGGGPGGLGGFGGLFGNQGRH
Sequences:
>Translated_347_residues MTHGGMYGGQPGGMPPGGFPPGPGPGMPGGMPPGGMPPGGMPPGGPGGPGGPGGPAGGIRSSLLGNPEVTSGERFALQNG KMLKATLGAQGMREFYARRGAMVAYQGAATFDAHWEGWGSRFRSFFSGGEGLNLMNVAGSGAVYLANQAQDIHILDLAGD GLTVDGKNVLAFDAGLNWDLVRVDSQVGIAGVGGYQIELRGNGQAVVCTSGAPLVMRVTTQNYYFADADAVVGWSSSLQV SMQAAVTSSAAWKPRGNTGESWQLQFSGEGYVIVQPCELLPPYNALAGSGLAGQFGLGQGGFAGNQLGGHGGGHGGHGGH GGGPGGFGGGPGGLGGFGGLFGNQGRH >Mature_346_residues THGGMYGGQPGGMPPGGFPPGPGPGMPGGMPPGGMPPGGMPPGGPGGPGGPGGPAGGIRSSLLGNPEVTSGERFALQNGK MLKATLGAQGMREFYARRGAMVAYQGAATFDAHWEGWGSRFRSFFSGGEGLNLMNVAGSGAVYLANQAQDIHILDLAGDG LTVDGKNVLAFDAGLNWDLVRVDSQVGIAGVGGYQIELRGNGQAVVCTSGAPLVMRVTTQNYYFADADAVVGWSSSLQVS MQAAVTSSAAWKPRGNTGESWQLQFSGEGYVIVQPCELLPPYNALAGSGLAGQFGLGQGGFAGNQLGGHGGGHGGHGGHG GGPGGFGGGPGGLGGFGGLFGNQGRH
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34484; Mature: 34353
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHGGMYGGQPGGMPPGGFPPGPGPGMPGGMPPGGMPPGGMPPGGPGGPGGPGGPAGGIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH SSLLGNPEVTSGERFALQNGKMLKATLGAQGMREFYARRGAMVAYQGAATFDAHWEGWGS HHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCEEEECCCCEECCHHHHHHH RFRSFFSGGEGLNLMNVAGSGAVYLANQAQDIHILDLAGDGLTVDGKNVLAFDAGLNWDL HHHHHHCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCEEECCCEEEEEECCCCEEE VRVDSQVGIAGVGGYQIELRGNGQAVVCTSGAPLVMRVTTQNYYFADADAVVGWSSSLQV EEECCCCCEEECCCEEEEEECCCCEEEEECCCCEEEEEEECCEEEECCCEEEECCCCEEE SMQAAVTSSAAWKPRGNTGESWQLQFSGEGYVIVQPCELLPPYNALAGSGLAGQFGLGQG EEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECHHHCCCCHHHHCCCCCCCCCCCCC GFAGNQLGGHGGGHGGHGGHGGGPGGFGGGPGGLGGFGGLFGNQGRH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure THGGMYGGQPGGMPPGGFPPGPGPGMPGGMPPGGMPPGGMPPGGPGGPGGPGGPAGGIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH SSLLGNPEVTSGERFALQNGKMLKATLGAQGMREFYARRGAMVAYQGAATFDAHWEGWGS HHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCEEEECCCCEECCHHHHHHH RFRSFFSGGEGLNLMNVAGSGAVYLANQAQDIHILDLAGDGLTVDGKNVLAFDAGLNWDL HHHHHHCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCEEECCCEEEEEECCCCEEE VRVDSQVGIAGVGGYQIELRGNGQAVVCTSGAPLVMRVTTQNYYFADADAVVGWSSSLQV EEECCCCCEEECCCEEEEEECCCCEEEEECCCCEEEEEEECCEEEECCCEEEECCCCEEE SMQAAVTSSAAWKPRGNTGESWQLQFSGEGYVIVQPCELLPPYNALAGSGLAGQFGLGQG EEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECHHHCCCCHHHHCCCCCCCCCCCCC GFAGNQLGGHGGGHGGHGGHGGGPGGFGGGPGGLGGFGGLFGNQGRH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA