| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314104
Identifier: 158314104
GI number: 158314104
Start: 2713116
End: 2713928
Strand: Direct
Name: 158314104
Synonym: Franean1_2271
Alternate gene names: NA
Gene position: 2713116-2713928 (Clockwise)
Preceding gene: 158314098
Following gene: 158314108
Centisome position: 30.21
GC content: 70.23
Gene sequence:
>813_bases ATGAGCCTGACTCTCGGATCCGGCCCGTTCGCCAGCCACCGAGCCGGCACCTTCAACTTCGACCTGGACACCGCCGCGCC CGCGCACGTCCTCTACCTCGAGGACGTGGCGCAGCGTGTCCGGGCGGAGCTCGCCGGCCAGACCGTACTCGACACCCGTC GCGCCAGGATCCTGTACGAGACCAACCATCTGGGCGTCTGGTATGTCCCGCTCGAGGACATCCGGCAGGACCTGCTGGAG CCGACCGATCACCACACCTACTGCCCGTTCAAGGGCACCGCCTCGTACTGGACGCTGCGGGTCGGCGACCGGGTCGAGGA GAACGTGCTGTGGTCCTACCCCGAGCCGGTGCCGGGCGCCCCGCCCATAGCGGGGCTGGCGGCGTTCTACTTCGACCGCC TGGACGCCTGGTACGAGGAGGACGAGCAGGTCTTCGGCCACCCCAGGGACCCCTACCACCGGGTGGACACCCGCCGCTCC TCCGACCAGGTCGAGGTGCTGGTGGGTGGTGAGACGGTGGCCCGGACCGCGCGCCCGGTGAAGCTCTTCGAGACGTCCCT GCCGCCCCGCTGGTACATCCCGCTCGAGGACGTCCGGGCCGAGGCCCTGGAGGGTTCCGGGACGCACACGGTGTGCGCCT ACAAGGGCCAGGCGTCCTACTACACGGTGCGTGGTGGCGGCGAGGTGATCACGGACGGCGCCTGGCACTACCCGTCACCG CTGCCGGAGTCGGCCGGGATCGCCGGGCTGGTGTCGTTCCTCGGCAAGGGAATCACGGTTCTGGTCAACGGCGAGCCCGC CCCCGGAACCTGA
Upstream 100 bases:
>100_bases CGAGGCTGCGCGTGGTCATGATGGCGGATCATGTAGATGTCGTTCGCCGCGGCGGTGGAACGGCAGGAAGGTGTGCTGAA CCCGCCGTGTTGGGCCTGGC
Downstream 100 bases:
>100_bases GGCGAGCCCGCCGCGCCCCGGAACCTGACCGAAAGCTCGGCTCAGTTACTCGCCCTTTGGTTTCTTCCTCGCCGTTTCGG GGTCGATCTCGGCCGAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSLTLGSGPFASHRAGTFNFDLDTAAPAHVLYLEDVAQRVRAELAGQTVLDTRRARILYETNHLGVWYVPLEDIRQDLLE PTDHHTYCPFKGTASYWTLRVGDRVEENVLWSYPEPVPGAPPIAGLAAFYFDRLDAWYEEDEQVFGHPRDPYHRVDTRRS SDQVEVLVGGETVARTARPVKLFETSLPPRWYIPLEDVRAEALEGSGTHTVCAYKGQASYYTVRGGGEVITDGAWHYPSP LPESAGIAGLVSFLGKGITVLVNGEPAPGT
Sequences:
>Translated_270_residues MSLTLGSGPFASHRAGTFNFDLDTAAPAHVLYLEDVAQRVRAELAGQTVLDTRRARILYETNHLGVWYVPLEDIRQDLLE PTDHHTYCPFKGTASYWTLRVGDRVEENVLWSYPEPVPGAPPIAGLAAFYFDRLDAWYEEDEQVFGHPRDPYHRVDTRRS SDQVEVLVGGETVARTARPVKLFETSLPPRWYIPLEDVRAEALEGSGTHTVCAYKGQASYYTVRGGGEVITDGAWHYPSP LPESAGIAGLVSFLGKGITVLVNGEPAPGT >Mature_269_residues SLTLGSGPFASHRAGTFNFDLDTAAPAHVLYLEDVAQRVRAELAGQTVLDTRRARILYETNHLGVWYVPLEDIRQDLLEP TDHHTYCPFKGTASYWTLRVGDRVEENVLWSYPEPVPGAPPIAGLAAFYFDRLDAWYEEDEQVFGHPRDPYHRVDTRRSS DQVEVLVGGETVARTARPVKLFETSLPPRWYIPLEDVRAEALEGSGTHTVCAYKGQASYYTVRGGGEVITDGAWHYPSPL PESAGIAGLVSFLGKGITVLVNGEPAPGT
Specific function: Unknown
COG id: COG2343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29843; Mature: 29711
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTLGSGPFASHRAGTFNFDLDTAAPAHVLYLEDVAQRVRAELAGQTVLDTRRARILYE CEEECCCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCHHHHCCCEEEEEE TNHLGVWYVPLEDIRQDLLEPTDHHTYCPFKGTASYWTLRVGDRVEENVLWSYPEPVPGA ECCCEEEEEEHHHHHHHHCCCCCCCEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCC PPIAGLAAFYFDRLDAWYEEDEQVFGHPRDPYHRVDTRRSSDQVEVLVGGETVARTARPV CCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHCCCCC KLFETSLPPRWYIPLEDVRAEALEGSGTHTVCAYKGQASYYTVRGGGEVITDGAWHYPSP EEEECCCCCEEECCHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCEEEECCCCCCCCC LPESAGIAGLVSFLGKGITVLVNGEPAPGT CCCCCCHHHHHHHHCCCEEEEECCCCCCCC >Mature Secondary Structure SLTLGSGPFASHRAGTFNFDLDTAAPAHVLYLEDVAQRVRAELAGQTVLDTRRARILYE EEECCCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCHHHHCCCEEEEEE TNHLGVWYVPLEDIRQDLLEPTDHHTYCPFKGTASYWTLRVGDRVEENVLWSYPEPVPGA ECCCEEEEEEHHHHHHHHCCCCCCCEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCC PPIAGLAAFYFDRLDAWYEEDEQVFGHPRDPYHRVDTRRSSDQVEVLVGGETVARTARPV CCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHCCCCC KLFETSLPPRWYIPLEDVRAEALEGSGTHTVCAYKGQASYYTVRGGGEVITDGAWHYPSP EEEECCCCCEEECCHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCEEEECCCCCCCCC LPESAGIAGLVSFLGKGITVLVNGEPAPGT CCCCCCHHHHHHHHCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA