| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is baeB [H]
Identifier: 158314097
GI number: 158314097
Start: 2707020
End: 2707730
Strand: Direct
Name: baeB [H]
Synonym: Franean1_2264
Alternate gene names: 158314097
Gene position: 2707020-2707730 (Clockwise)
Preceding gene: 158314095
Following gene: 158314098
Centisome position: 30.14
GC content: 72.15
Gene sequence:
>711_bases GTGAGCGATCGCCTGTACTTCCGCCAGTTGCTGTCCGGCCGCGACTTCGCGGTGGGTGATCCCGCCGCGACCCAGATGGT CAACTTCGTCTACCTCATCGGTGACCGGGGGACGGGCGAGGCCGTCGTGGTCGACCCCGCCTACCGGGTGGGCGACCTGC TCGACGTGCTGGCCGCCGACGACATGCGGCTGACCGGGGCGCTGGTCACCCACCACCACGCCGACCATGTCGGCGGCACG GCCTTCGGCATCGAGCTGGAGGGGATCCGCGAGCTGCTGGAGCGCACATCCGTCCCGATCCACCTGCAGCGGGATGAGGC CGAGTGGGTGCGGCGCGGGACGGGCGTGGGGGCCGCCGAGCTCGTCGAGCACGGCGACGACGACGTGGTCACCGTCGGCG CGGTGGACATCCGCCTGCTGCACACCCCCGGTCACACCCCGGGCAGCCAGTGCTTCCTCGTGGACGGGCGGCTCGTCGCC GGGGACACTCTGTTCCTCGAGGGTTGCGGGCGGATGGACTTCCCGGGCGGGGACGCCGCGGCGATGTACGACAGCCTGCG CCGCCTGGGCGCGCTGCCCGACGACGTCACCGTCTACCCGGGTCACCGGTACTCGGCGGAGTCCGCCGCGGAGCTCGGCG TGGTGCGCAAGATGAACTACGTCTTCCGGCCGACCAGCTCCCGGCAGTGGCTGGCGATGCTCGGCGCCTGA
Upstream 100 bases:
>100_bases CGGCCCACGCCGCCCCGCCCCGCGATGGCACGTGGTGGGTGACGGTCCGCCCGCTCCACCGGTTCTGGAGTGCGGGCCCG GCGCTCCGTAGGCTCGCGGT
Downstream 100 bases:
>100_bases CCGCCCGCGTGGTGGGTATGGACACGGCGGGGGTGAGCGCCGTGGACGCTGACGGCTCGGCCGGCACACGGCCCCGGGTC GAGATCGAGTACTGCACCCG
Product: beta-lactamase domain-containing protein
Products: Reduced glutathione; H+; D-Lactate [C]
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSDRLYFRQLLSGRDFAVGDPAATQMVNFVYLIGDRGTGEAVVVDPAYRVGDLLDVLAADDMRLTGALVTHHHADHVGGT AFGIELEGIRELLERTSVPIHLQRDEAEWVRRGTGVGAAELVEHGDDDVVTVGAVDIRLLHTPGHTPGSQCFLVDGRLVA GDTLFLEGCGRMDFPGGDAAAMYDSLRRLGALPDDVTVYPGHRYSAESAAELGVVRKMNYVFRPTSSRQWLAMLGA
Sequences:
>Translated_236_residues MSDRLYFRQLLSGRDFAVGDPAATQMVNFVYLIGDRGTGEAVVVDPAYRVGDLLDVLAADDMRLTGALVTHHHADHVGGT AFGIELEGIRELLERTSVPIHLQRDEAEWVRRGTGVGAAELVEHGDDDVVTVGAVDIRLLHTPGHTPGSQCFLVDGRLVA GDTLFLEGCGRMDFPGGDAAAMYDSLRRLGALPDDVTVYPGHRYSAESAAELGVVRKMNYVFRPTSSRQWLAMLGA >Mature_235_residues SDRLYFRQLLSGRDFAVGDPAATQMVNFVYLIGDRGTGEAVVVDPAYRVGDLLDVLAADDMRLTGALVTHHHADHVGGTA FGIELEGIRELLERTSVPIHLQRDEAEWVRRGTGVGAAELVEHGDDDVVTVGAVDIRLLHTPGHTPGSQCFLVDGRLVAG DTLFLEGCGRMDFPGGDAAAMYDSLRRLGALPDDVTVYPGHRYSAESAAELGVVRKMNYVFRPTSSRQWLAMLGA
Specific function: Probably involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=200, Percent_Identity=32.5, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI21703352, Length=222, Percent_Identity=35.1351351351351, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI116642887, Length=222, Percent_Identity=35.1351351351351, Blast_Score=84, Evalue=7e-17, Organism=Homo sapiens, GI46361987, Length=187, Percent_Identity=33.6898395721925, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI14150041, Length=187, Percent_Identity=33.6898395721925, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1786406, Length=181, Percent_Identity=33.1491712707182, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787158, Length=185, Percent_Identity=32.972972972973, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17538952, Length=195, Percent_Identity=29.2307692307692, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI21356335, Length=191, Percent_Identity=32.9842931937173, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24667703, Length=191, Percent_Identity=32.9842931937173, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24667711, Length=191, Percent_Identity=32.9842931937173, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI221330176, Length=223, Percent_Identity=27.3542600896861, Blast_Score=87, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: 3.1.2.6 [C]
Molecular weight: Translated: 25533; Mature: 25402
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00743 BETA_LACTAMASE_B_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRLYFRQLLSGRDFAVGDPAATQMVNFVYLIGDRGTGEAVVVDPAYRVGDLLDVLAAD CCCHHHHHHHHCCCCCCCCCHHHHHHEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCC DMRLTGALVTHHHADHVGGTAFGIELEGIRELLERTSVPIHLQRDEAEWVRRGTGVGAAE CCEEHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCHHH LVEHGDDDVVTVGAVDIRLLHTPGHTPGSQCFLVDGRLVAGDTLFLEGCGRMDFPGGDAA HHHCCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCEEEECCEEEEECCCCCCCCCCCHH AMYDSLRRLGALPDDVTVYPGHRYSAESAAELGVVRKMNYVFRPTSSRQWLAMLGA HHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHCCEEECCCCCCCHHEECCC >Mature Secondary Structure SDRLYFRQLLSGRDFAVGDPAATQMVNFVYLIGDRGTGEAVVVDPAYRVGDLLDVLAAD CCHHHHHHHHCCCCCCCCCHHHHHHEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCC DMRLTGALVTHHHADHVGGTAFGIELEGIRELLERTSVPIHLQRDEAEWVRRGTGVGAAE CCEEHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCHHH LVEHGDDDVVTVGAVDIRLLHTPGHTPGSQCFLVDGRLVAGDTLFLEGCGRMDFPGGDAA HHHCCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCEEEECCEEEEECCCCCCCCCCCHH AMYDSLRRLGALPDDVTVYPGHRYSAESAAELGVVRKMNYVFRPTSSRQWLAMLGA HHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHCCEEECCCCCCCHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; (R)-S-Lactoylglutathione [C]
Specific reaction: H2O + (R)-S-Lactoylglutathione --> Reduced glutathione + H+ + D-Lactate [C]
General reaction: Thioester hydrolysis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA