| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is bcsA [H]
Identifier: 158314090
GI number: 158314090
Start: 2697476
End: 2699329
Strand: Direct
Name: bcsA [H]
Synonym: Franean1_2257
Alternate gene names: 158314090
Gene position: 2697476-2699329 (Clockwise)
Preceding gene: 158314088
Following gene: 158314094
Centisome position: 30.03
GC content: 66.83
Gene sequence:
>1854_bases GTGAGTGGTCCGGTGCGCGAGGCGTACGTTCCGGAGGATGTGGCGGGTGGCGTCGGGGCGCTGACCGTCCCCCTGCGGTA CCAGAAGTTCACGCCGGGCCTCCGGGAGCCGATGCGGGACCATTCCGGGAACCGGGTCCGGTCGACGGCCGTGATGAGCC GGTGGCAGGAACTGCAGTACTGGCTGATCACGGTGGGGTGGCTGGCTGCCACGGTGTTCTTCTGGCGGTGGTGGCTACGC GCCGACAACGTCGGCTCGATTGTGTTGTTCGTGCTGATGTCGGTGTCCTTCTTCTACGTCGGTGCCTTCCTGGCGGGGAT GTATCTGATCTTTGTCGGGCACATGCGCCGGCCCGTTCCCATTCCGGTGCGCCAGGCGGAGATCTCGGCGCCGATCCGGC GGGTTGCCGTCATCAGCCTCACCGTCCCCGGCTCGGAGTCCCTCGAGATCGTCCGTCGCCAGCTGGTGGCGATGAGCAGG ATCAGATATCCACACGACAGCTGGATACTCGTCGACAAGGTCTCCTCACCGGAGATCGAGGAGCTCGCCCGGTCGGTAGG TGTCCGGTACTTCTCGCGGCACGACGAGGCCCGCTGGGGAAGGGAGGGGGTGGCGGGCTGGAACCGCCGGTTCCCGCCGT TCAAACGCAAGACCAAGGCCGGCAACGTCAACAGCTGGCTGGACGCCCACGGCCACGAGTACAGCCACTTCACCCAGCTC GACATCGATCACATACCGAACCCCGACTACCTGGACCGGGTGCTCGGCTACTTCGCGGACCCCAAGGTCAAGTGGGTGCA GGCGCCGAGTGTGTACGGGAACTTCGAACACTGGACCGCCCGGGGCGCGGCCGAGCAGGAACTGGGTCTGCAGGGACCGC TTCAGATGGGGTTCTTCGGGTTCTCGCGGACGCCCTTCATCATCGGGAGTCACTGCACCTACGACACGGCCGGCATCCTC GAGATCGGCGGGTTCCAGCCGACCAGGGCGGAGGACCACCTCGACACCGTCTGCCTGGCGGCGCGCGGATATCAGGGCGT CTTCGTCCCGGACGTCATCGCGACCGGTGACGGGCCCGAGACGTTCGAGACCTATCTGTCGCAGCAGTTCGCGTGGGCGT ACTCGATGATCGAGGTCCTCCTGCGGCACACGCCCCGACTCCTCCGCAGGTACGGACCGCGGCAGGCCGTCCAGTTTCTC TTCGCCCAGACCTGGTACACCCTCTGGTCGCTGTCGATGCTGATCCTCTTCGCGCTGCCGCTCCTCGCGCTCTGCCTGAA CCAGGCCATCGCGAAGGTCCACTATCTGGATTTCCTCGCCCACAGTGTTCCGCTGAGCGTCACCTCGCTGCTGATCTGGT GGTGGAGCCGGCCGTGGCACGTGCCGGCCGGTATACGGCTGACCTGGCGCGGGATCGTCCTGCACGCCGCCCGGTGGATC GTGGTCCTCTCCGCGCTCGTCCAGGTCGTCCTCAGAGTCAAGAAGCCATACATGATCACGAAGAAGGGAGTGGGGGGTGG GGCCGGAACCGTCTCACTGCGACCCATGGCTCCCTACATCGCGATGGTGGTTGTCCCGCTCGCGGCCTGCTGGACCTATC TCACCGTCCATCACGCGGGCGGGAGATCGGGCTATCTCCTGTTCGCCCTGCAGGACTCCCTGACCTTCCTGCTGGTCCTG TCCGTCGTGATCCTGCAGGAGGTCCGGCTGTCCGGAGACGGGGGTACGCCGCTCGCCGTTCGGCTGCGCCGCGCGGCGGC GCCGTTGGCGGCGACGGGACTGCTCACGGCCGCGACGGTCGCCACCGCGATCGCCTCATGGCACCCGATCTGGGAGGCGG TCTCCTCTGCGTGA
Upstream 100 bases:
>100_bases GGCGCTCTTCTCTCCGTACGCCTTGTGCGCGGGGACGCATGGCGACTGTTTTCTTCGCCGCTCGTCGAAACGAGCGCGCG GATTCTTTTGGGGGAGACCG
Downstream 100 bases:
>100_bases GGTCGTGCGGGCGGTGTGTCCACACAGAGTGAGTCCGAGTGGACGGCCGTGCCGCATCCCCTGGCAGACCGACGACGCGA ACAACGTGCTGGCGATCAGC
Product: putative transmembrane cellulose synthase catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MSGPVREAYVPEDVAGGVGALTVPLRYQKFTPGLREPMRDHSGNRVRSTAVMSRWQELQYWLITVGWLAATVFFWRWWLR ADNVGSIVLFVLMSVSFFYVGAFLAGMYLIFVGHMRRPVPIPVRQAEISAPIRRVAVISLTVPGSESLEIVRRQLVAMSR IRYPHDSWILVDKVSSPEIEELARSVGVRYFSRHDEARWGREGVAGWNRRFPPFKRKTKAGNVNSWLDAHGHEYSHFTQL DIDHIPNPDYLDRVLGYFADPKVKWVQAPSVYGNFEHWTARGAAEQELGLQGPLQMGFFGFSRTPFIIGSHCTYDTAGIL EIGGFQPTRAEDHLDTVCLAARGYQGVFVPDVIATGDGPETFETYLSQQFAWAYSMIEVLLRHTPRLLRRYGPRQAVQFL FAQTWYTLWSLSMLILFALPLLALCLNQAIAKVHYLDFLAHSVPLSVTSLLIWWWSRPWHVPAGIRLTWRGIVLHAARWI VVLSALVQVVLRVKKPYMITKKGVGGGAGTVSLRPMAPYIAMVVVPLAACWTYLTVHHAGGRSGYLLFALQDSLTFLLVL SVVILQEVRLSGDGGTPLAVRLRRAAAPLAATGLLTAATVATAIASWHPIWEAVSSA
Sequences:
>Translated_617_residues MSGPVREAYVPEDVAGGVGALTVPLRYQKFTPGLREPMRDHSGNRVRSTAVMSRWQELQYWLITVGWLAATVFFWRWWLR ADNVGSIVLFVLMSVSFFYVGAFLAGMYLIFVGHMRRPVPIPVRQAEISAPIRRVAVISLTVPGSESLEIVRRQLVAMSR IRYPHDSWILVDKVSSPEIEELARSVGVRYFSRHDEARWGREGVAGWNRRFPPFKRKTKAGNVNSWLDAHGHEYSHFTQL DIDHIPNPDYLDRVLGYFADPKVKWVQAPSVYGNFEHWTARGAAEQELGLQGPLQMGFFGFSRTPFIIGSHCTYDTAGIL EIGGFQPTRAEDHLDTVCLAARGYQGVFVPDVIATGDGPETFETYLSQQFAWAYSMIEVLLRHTPRLLRRYGPRQAVQFL FAQTWYTLWSLSMLILFALPLLALCLNQAIAKVHYLDFLAHSVPLSVTSLLIWWWSRPWHVPAGIRLTWRGIVLHAARWI VVLSALVQVVLRVKKPYMITKKGVGGGAGTVSLRPMAPYIAMVVVPLAACWTYLTVHHAGGRSGYLLFALQDSLTFLLVL SVVILQEVRLSGDGGTPLAVRLRRAAAPLAATGLLTAATVATAIASWHPIWEAVSSA >Mature_616_residues SGPVREAYVPEDVAGGVGALTVPLRYQKFTPGLREPMRDHSGNRVRSTAVMSRWQELQYWLITVGWLAATVFFWRWWLRA DNVGSIVLFVLMSVSFFYVGAFLAGMYLIFVGHMRRPVPIPVRQAEISAPIRRVAVISLTVPGSESLEIVRRQLVAMSRI RYPHDSWILVDKVSSPEIEELARSVGVRYFSRHDEARWGREGVAGWNRRFPPFKRKTKAGNVNSWLDAHGHEYSHFTQLD IDHIPNPDYLDRVLGYFADPKVKWVQAPSVYGNFEHWTARGAAEQELGLQGPLQMGFFGFSRTPFIIGSHCTYDTAGILE IGGFQPTRAEDHLDTVCLAARGYQGVFVPDVIATGDGPETFETYLSQQFAWAYSMIEVLLRHTPRLLRRYGPRQAVQFLF AQTWYTLWSLSMLILFALPLLALCLNQAIAKVHYLDFLAHSVPLSVTSLLIWWWSRPWHVPAGIRLTWRGIVLHAARWIV VLSALVQVVLRVKKPYMITKKGVGGGAGTVSLRPMAPYIAMVVVPLAACWTYLTVHHAGGRSGYLLFALQDSLTFLLVLS VVILQEVRLSGDGGTPLAVRLRRAAAPLAATGLLTAATVATAIASWHPIWEAVSSA
Specific function: Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component for mechanical and chemical protection [H]
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PilZ domain [H]
Homologues:
Organism=Escherichia coli, GI87082284, Length=430, Percent_Identity=25.1162790697674, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003919 - InterPro: IPR005150 - InterPro: IPR001173 - InterPro: IPR009875 [H]
Pfam domain/function: PF03552 Cellulose_synt; PF00535 Glycos_transf_2; PF07238 PilZ [H]
EC number: =2.4.1.12 [H]
Molecular weight: Translated: 69114; Mature: 68983
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPVREAYVPEDVAGGVGALTVPLRYQKFTPGLREPMRDHSGNRVRSTAVMSRWQELQY CCCCCCCCCCCHHHCCCCCEEEECEEHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH WLITVGWLAATVFFWRWWLRADNVGSIVLFVLMSVSFFYVGAFLAGMYLIFVGHMRRPVP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IPVRQAEISAPIRRVAVISLTVPGSESLEIVRRQLVAMSRIRYPHDSWILVDKVSSPEIE CCCHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH ELARSVGVRYFSRHDEARWGREGVAGWNRRFPPFKRKTKAGNVNSWLDAHGHEYSHFTQL HHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCCEEEE DIDHIPNPDYLDRVLGYFADPKVKWVQAPSVYGNFEHWTARGAAEQELGLQGPLQMGFFG ECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCHHHCCCCCCHHHCEEC FSRTPFIIGSHCTYDTAGILEIGGFQPTRAEDHLDTVCLAARGYQGVFVPDVIATGDGPE CCCCCEEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCHH TFETYLSQQFAWAYSMIEVLLRHTPRLLRRYGPRQAVQFLFAQTWYTLWSLSMLILFALP HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLALCLNQAIAKVHYLDFLAHSVPLSVTSLLIWWWSRPWHVPAGIRLTWRGIVLHAARWI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHHHHHH VVLSALVQVVLRVKKPYMITKKGVGGGAGTVSLRPMAPYIAMVVVPLAACWTYLTVHHAG HHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC GRSGYLLFALQDSLTFLLVLSVVILQEVRLSGDGGTPLAVRLRRAAAPLAATGLLTAATV CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH ATAIASWHPIWEAVSSA HHHHHHHHHHHHHHHCC >Mature Secondary Structure SGPVREAYVPEDVAGGVGALTVPLRYQKFTPGLREPMRDHSGNRVRSTAVMSRWQELQY CCCCCCCCCCHHHCCCCCEEEECEEHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH WLITVGWLAATVFFWRWWLRADNVGSIVLFVLMSVSFFYVGAFLAGMYLIFVGHMRRPVP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IPVRQAEISAPIRRVAVISLTVPGSESLEIVRRQLVAMSRIRYPHDSWILVDKVSSPEIE CCCHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH ELARSVGVRYFSRHDEARWGREGVAGWNRRFPPFKRKTKAGNVNSWLDAHGHEYSHFTQL HHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCCEEEE DIDHIPNPDYLDRVLGYFADPKVKWVQAPSVYGNFEHWTARGAAEQELGLQGPLQMGFFG ECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCHHHCCCCCCHHHCEEC FSRTPFIIGSHCTYDTAGILEIGGFQPTRAEDHLDTVCLAARGYQGVFVPDVIATGDGPE CCCCCEEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCHH TFETYLSQQFAWAYSMIEVLLRHTPRLLRRYGPRQAVQFLFAQTWYTLWSLSMLILFALP HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLALCLNQAIAKVHYLDFLAHSVPLSVTSLLIWWWSRPWHVPAGIRLTWRGIVLHAARWI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHHHHHH VVLSALVQVVLRVKKPYMITKKGVGGGAGTVSLRPMAPYIAMVVVPLAACWTYLTVHHAG HHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC GRSGYLLFALQDSLTFLLVLSVVILQEVRLSGDGGTPLAVRLRRAAAPLAATGLLTAATV CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH ATAIASWHPIWEAVSSA HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]