| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314067
Identifier: 158314067
GI number: 158314067
Start: 2671703
End: 2672227
Strand: Direct
Name: 158314067
Synonym: Franean1_2234
Alternate gene names: NA
Gene position: 2671703-2672227 (Clockwise)
Preceding gene: 158314066
Following gene: 158314068
Centisome position: 29.74
GC content: 69.14
Gene sequence:
>525_bases ATGTCGATTGGACACGCGCTGCTCGGGCTCCTCGAGTCCGGCCCGCGACACGGCTACGACCTCAAACGGTCCTACGACGA CCGGTTCGGGCACGACCGGCCGCTCCATTACGGGCAGGTCTACGCGACCCTGGCCAGGCTGCTGAAGAACGGCCTGGTGG AGGTCGACGGCGTCACGCCTGGCGGCGGTCCCGACCGCAAGCGCTACGCGATCACCGACACCGGTATCGCCGACGTCGAA CGCTGGCTGGCTCAGCCCGAGAAGCCCGATCTCTACCTGCAGAGCACGCTCTACACGAAGATCGTGCTCGCACTGCTGAC CGGGCGGCCCGCGGTCGACCTCCTGGACGCCCAGCGCTCCGAGCACCTTCGGCTGATGCGCGAGCTCACTCGGCGCAAGG TCGGCGGAGACCTGGCCGACCAGCTCGTCTGCGACCACGCGCTGTTCCACCTCGAGGCCGATCTCCGGTTCCTGGAGCTG GCCGCGGCCCGCCTCGACCAGCTCGCGGCGAAGGTCCGCTCATGA
Upstream 100 bases:
>100_bases CGACATCCCGCCCGGCGGTTGATGGCGGTGTCGTGGGAGCGTCCGCCGGCCTGTACCCCTCTATACGCGGCATGTATACA TCTAATGTATAGTCGCGATC
Downstream 100 bases:
>100_bases CGGGCGCGACCGCCGAGACCGGCGCAGGCGCAGGCACCACTGCCACCCACGCCGGCGGAACGCGGCCCGTGGACGCCGCT GCCGTCGCACCGCTGCTGCG
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR Family Transcriptional Regulator; PadR-Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator PadR Family; Transcriptional Regulator-Like Protein; PadR-Like Transcriptional Regulator; PadR Family Regulator; Secreted Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTPGGGPDRKRYAITDTGIADVE RWLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRSEHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLEL AAARLDQLAAKVRS
Sequences:
>Translated_174_residues MSIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTPGGGPDRKRYAITDTGIADVE RWLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRSEHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLEL AAARLDQLAAKVRS >Mature_173_residues SIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTPGGGPDRKRYAITDTGIADVER WLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRSEHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLELA AARLDQLAAKVRS
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19451; Mature: 19319
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTP CCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCC GGGPDRKRYAITDTGIADVERWLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRS CCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLELAAARLDQLAAKVRS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTP CHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCC GGGPDRKRYAITDTGIADVERWLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRS CCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLELAAARLDQLAAKVRS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA