| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is hemH [H]
Identifier: 158314065
GI number: 158314065
Start: 2669519
End: 2670784
Strand: Direct
Name: hemH [H]
Synonym: Franean1_2232
Alternate gene names: 158314065
Gene position: 2669519-2670784 (Clockwise)
Preceding gene: 158314064
Following gene: 158314066
Centisome position: 29.72
GC content: 75.36
Gene sequence:
>1266_bases ATGGAAGGGGACATGACGGTGCCGACGGACACCGCCGGCCACGGCCGCGGGATCGACGTGGACGCGCTGCTGCTCGTCTC CTTCGGCGGTCCGGAGGGGCCGGAGGACGTCCTGCCGTTCCTGCGCAACGTGACCCGCGGCCGCGGGGTGCCCGAGGCGC GGCTGGCCGAGGTCGCGGCGCACTACGACCGCTTCGGCGGGCGCAGCCCGATCAACGACCAGAACCGGGCGCTGCTCGCC GCGCTGCGGGAGCGGCTGGCCCCGATGCCCGTGTACTGGGGCAACCGGAACTGGCAGCCGTACCTCGCCGACGCCGTGGC GCGCATGCGGGCCGACGGCGTGCGCCGGGCGGCCTGCTTCGTGACGTCCGCGTTCGCGTCCTACTCGGGGTGCCGGCAGT ACCGGGAGGATCTGGCGGCGGCCCTGGAGCAGGTCGGCCCGGGCGCCCCCGACCTGGTGAAGCTGCGGCTGTTCTTCGAC CACCCGGGATTCGTCGAGCCGATGGTCGACCACTGCGTGCGGGCGCTCGCGTCGCTGCCGGCGGCGGTGCGCGACGAGGC CCGGCTGGTGTTCACCGCCCATGCGCTGCCCCGCTCGCAGGCGGCCGCGAGCGGGCCGGACGGCGGAGCCTACGAGCGCC AGCTCCGCGCGGCCGCCGGTGTGATCGCGCAGCGGGTCGCCGCGCGCGCCGGTACCCGGCACGAGTGGCAGGTCGCCTAC TGCAGCCGCAGCGGCCCGCCGAGCGTGCCCTGGCTCGAACCGGACGTCAACGACGCCCTGGCGGCGCTCGCGGACGGCGG CGCGCGCGCCGCGGTGATCGTGCCGGTCGGTTTCGTCAGCGACCACATGGAGGTCGTCTACGATCTCGACGTCGAGGCGG TGCGCACCGCCTCGGAACGCGGTCTGGCGGTCGCCCGGGCGGGCACCGTCGGGACGGACCCGCGCTTCGTCGGGATGGTG GCCGATCTGGTCGCCGAGCGCCGCTTCCCCGAGTGGGAGCGGCCCGCGCTGAGCGGCGAGGGGCCGTCCCACGACGTCTG CCCGCTGCACTGCTGTGACCCGGGTGCCCGCCGCCCGGCGGCGGCCGGTGTTCCGGCGGATCTCTGCGCGCACGGCCCGG CACGTTCCGGCGCGACGGCGTCACAGCCGGGCAGGCCGACGAACGCGGAGCGCTCCCGGGATGGTGAACCGCGCAACGAA GCGACGATACTGGTGGATGAGCGGGCAGGTATCTCGCGGTCCGACTCTCACCCCGCAGGCGAATAA
Upstream 100 bases:
>100_bases TCGACGAGATCCGGGGCCGGGTGCCGCGCTGACGGCGCGGGCCCGGCTGGCGGACGGGCGCGACGTACGACGGGGGCGAC GTACGACGGGGGCGACGTAC
Downstream 100 bases:
>100_bases GACGGAGCGATCCGAGACATGCAGCGATTTGTGTTCGACCCGCCGGAGCGGTTCGTGGTCGGGACCGTCGGGCAGCCCGG TGACCGCGTGTTCTTCCTCC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MEGDMTVPTDTAGHGRGIDVDALLLVSFGGPEGPEDVLPFLRNVTRGRGVPEARLAEVAAHYDRFGGRSPINDQNRALLA ALRERLAPMPVYWGNRNWQPYLADAVARMRADGVRRAACFVTSAFASYSGCRQYREDLAAALEQVGPGAPDLVKLRLFFD HPGFVEPMVDHCVRALASLPAAVRDEARLVFTAHALPRSQAAASGPDGGAYERQLRAAAGVIAQRVAARAGTRHEWQVAY CSRSGPPSVPWLEPDVNDALAALADGGARAAVIVPVGFVSDHMEVVYDLDVEAVRTASERGLAVARAGTVGTDPRFVGMV ADLVAERRFPEWERPALSGEGPSHDVCPLHCCDPGARRPAAAGVPADLCAHGPARSGATASQPGRPTNAERSRDGEPRNE ATILVDERAGISRSDSHPAGE
Sequences:
>Translated_421_residues MEGDMTVPTDTAGHGRGIDVDALLLVSFGGPEGPEDVLPFLRNVTRGRGVPEARLAEVAAHYDRFGGRSPINDQNRALLA ALRERLAPMPVYWGNRNWQPYLADAVARMRADGVRRAACFVTSAFASYSGCRQYREDLAAALEQVGPGAPDLVKLRLFFD HPGFVEPMVDHCVRALASLPAAVRDEARLVFTAHALPRSQAAASGPDGGAYERQLRAAAGVIAQRVAARAGTRHEWQVAY CSRSGPPSVPWLEPDVNDALAALADGGARAAVIVPVGFVSDHMEVVYDLDVEAVRTASERGLAVARAGTVGTDPRFVGMV ADLVAERRFPEWERPALSGEGPSHDVCPLHCCDPGARRPAAAGVPADLCAHGPARSGATASQPGRPTNAERSRDGEPRNE ATILVDERAGISRSDSHPAGE >Mature_421_residues MEGDMTVPTDTAGHGRGIDVDALLLVSFGGPEGPEDVLPFLRNVTRGRGVPEARLAEVAAHYDRFGGRSPINDQNRALLA ALRERLAPMPVYWGNRNWQPYLADAVARMRADGVRRAACFVTSAFASYSGCRQYREDLAAALEQVGPGAPDLVKLRLFFD HPGFVEPMVDHCVRALASLPAAVRDEARLVFTAHALPRSQAAASGPDGGAYERQLRAAAGVIAQRVAARAGTRHEWQVAY CSRSGPPSVPWLEPDVNDALAALADGGARAAVIVPVGFVSDHMEVVYDLDVEAVRTASERGLAVARAGTVGTDPRFVGMV ADLVAERRFPEWERPALSGEGPSHDVCPLHCCDPGARRPAAAGVPADLCAHGPARSGATASQPGRPTNAERSRDGEPRNE ATILVDERAGISRSDSHPAGE
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=327, Percent_Identity=27.217125382263, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI60499025, Length=327, Percent_Identity=27.217125382263, Blast_Score=112, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6324750, Length=328, Percent_Identity=23.780487804878, Blast_Score=87, Evalue=6e-18, Organism=Drosophila melanogaster, GI17864156, Length=330, Percent_Identity=24.5454545454545, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI45552018, Length=169, Percent_Identity=27.810650887574, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 44746; Mature: 44746
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGDMTVPTDTAGHGRGIDVDALLLVSFGGPEGPEDVLPFLRNVTRGRGVPEARLAEVAA CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH HYDRFGGRSPINDQNRALLAALRERLAPMPVYWGNRNWQPYLADAVARMRADGVRRAACF HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH VTSAFASYSGCRQYREDLAAALEQVGPGAPDLVKLRLFFDHPGFVEPMVDHCVRALASLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC AAVRDEARLVFTAHALPRSQAAASGPDGGAYERQLRAAAGVIAQRVAARAGTRHEWQVAY HHHCCCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE CSRSGPPSVPWLEPDVNDALAALADGGARAAVIVPVGFVSDHMEVVYDLDVEAVRTASER ECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECHHHHCHHEEECCCHHHHHHHHHC GLAVARAGTVGTDPRFVGMVADLVAERRFPEWERPALSGEGPSHDVCPLHCCDPGARRPA CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC AAGVPADLCAHGPARSGATASQPGRPTNAERSRDGEPRNEATILVDERAGISRSDSHPAG CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC E C >Mature Secondary Structure MEGDMTVPTDTAGHGRGIDVDALLLVSFGGPEGPEDVLPFLRNVTRGRGVPEARLAEVAA CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH HYDRFGGRSPINDQNRALLAALRERLAPMPVYWGNRNWQPYLADAVARMRADGVRRAACF HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH VTSAFASYSGCRQYREDLAAALEQVGPGAPDLVKLRLFFDHPGFVEPMVDHCVRALASLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC AAVRDEARLVFTAHALPRSQAAASGPDGGAYERQLRAAAGVIAQRVAARAGTRHEWQVAY HHHCCCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE CSRSGPPSVPWLEPDVNDALAALADGGARAAVIVPVGFVSDHMEVVYDLDVEAVRTASER ECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECHHHHCHHEEECCCHHHHHHHHHC GLAVARAGTVGTDPRFVGMVADLVAERRFPEWERPALSGEGPSHDVCPLHCCDPGARRPA CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC AAGVPADLCAHGPARSGATASQPGRPTNAERSRDGEPRNEATILVDERAGISRSDSHPAG CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA