| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314050
Identifier: 158314050
GI number: 158314050
Start: 2653127
End: 2653468
Strand: Direct
Name: 158314050
Synonym: Franean1_2217
Alternate gene names: NA
Gene position: 2653127-2653468 (Clockwise)
Preceding gene: 158314048
Following gene: 158314052
Centisome position: 29.54
GC content: 65.79
Gene sequence:
>342_bases GTGACGTGTCCGTCCCCCCACCGGAACGCCACCGGACACCTTGCCTGCAACGCAGCTATTTCAGCAGACCGGCACCTGGC GTTACCAACAGGTTCCCGGACGCATCAGGTCCGGCGGGCATTCCGGTCCAGTTCGGTGACCGACCGTGCCGTCCGCGACC GGGTGGTGGCGGGTCTCGGGGCGGGTGTCGCACCGGAGAAGCAGCACTGGGCCGATCATTGCCGTCGCACCTACCAGCCG ATCTTACGGGTGGCTCGAATTCGACTACGGACCGTGGGTGGCGAGCGTTGCGGTAGCTGTCGGTGGCCGCGAGTGCGGTC CGTCATCATCGTTATCATGTGA
Upstream 100 bases:
>100_bases CAGCGGCGACCGAGATGAGCCTGCTCACCGCGTGGTCGACTCCCGCTGTGTTGCGCTGTGGGTCACGTCGCTCCCGTTCT GCCCGCCGTCGGGCATACGC
Downstream 100 bases:
>100_bases TCGCTGACGGTGTCCGTCTCGGTGGGTCAGCGGGCGTTGTCGGCTGACGGGCTGCCGGCGGCGGCCCGTCACGGCCCCGG GCGGCCCCACCTGTCGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MTCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLGAGVAPEKQHWADHCRRTYQP ILRVARIRLRTVGGERCGSCRWPRVRSVIIVIM
Sequences:
>Translated_113_residues MTCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLGAGVAPEKQHWADHCRRTYQP ILRVARIRLRTVGGERCGSCRWPRVRSVIIVIM >Mature_112_residues TCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLGAGVAPEKQHWADHCRRTYQPI LRVARIRLRTVGGERCGSCRWPRVRSVIIVIM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12545; Mature: 12413
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLG CCCCCCCCCCCCCEEECCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC AGVAPEKQHWADHCRRTYQPILRVARIRLRTVGGERCGSCRWPRVRSVIIVIM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure TCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLG CCCCCCCCCCCCEEECCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC AGVAPEKQHWADHCRRTYQPILRVARIRLRTVGGERCGSCRWPRVRSVIIVIM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA