Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yiiP [C]

Identifier: 158314038

GI number: 158314038

Start: 2637926

End: 2638879

Strand: Direct

Name: yiiP [C]

Synonym: Franean1_2205

Alternate gene names: 158314038

Gene position: 2637926-2638879 (Clockwise)

Preceding gene: 158314037

Following gene: 158314040

Centisome position: 29.37

GC content: 71.49

Gene sequence:

>954_bases
GTGAGCACAGAAGGCGGCACCAAGGCGGTCGTGGCGGCACTGCTCGCGAACCTGGGCATCGCGGTCGCGAAGTTCGTGGC
GTTCCTCTTCACCCGTTCGTCGTCCATGCTCGCCGAGTCGATCCACTCCGTCGCCGACTCGAGCAACCAGGCGTTGCTCC
TGCTCGGGCAGCGCAACGCCAGCCAGCCGGCGGACGAGGAGCACCCCTTCGGCTACGGGCGTTCCCGCTACATCGCGGGC
TTCCTCGTCGGCATCGTGCTGTTCAGCGTCGGCGGGCTGTTCTCCGTCTACGAGGGCGTGGAGAAGCTGCGCCACCCCCA
CGAGCTGGAGAGCGGCGTGGTGGCGATCGTGGTCCTCGCCGTCGCGATCGTGCTCGAGAGTTTCTCGTTCCGGACGGCCA
TCAAGGAGTCGAGGCATCTCAAGGGCTCGGGGTCGTGGTGGCGCTTCATCCGGGACGCGCGCTCCCCGGAGCTGCCGGTC
GTCCTGCTGGAGGACCTGGCCGCGCTGTGCGGCCTGGTGTTCGCCCTGGCCGGGGTCGGCCTGACGCTGCTGCTCGACGA
ACCGCTCTGGGACGGCGCCGGCACCCTCGCGATCGGCATCCTGCTGCTGGCCGTCGCCGTGATCGTCGCGATGGAGACCT
ACGGGATGCTGGTCGGGGAGGCCGCCACCCCGCAGACCGTCGAGGCGATCCGGCGGGCGCTGAGCTCGGCGCCGGCGGTC
ACCACCGTGATCCACATGCGGACCCTGCACCTCGGCCCGGACGAGCTTCTGGTCGCGGCCAAGATCGGGCTCGACCCGGA
TCTGACCACGGCCCAGGTCGCCGCCGCCATCAACGAGGCCGAGGCGCTGCTGCGCGACGCCGTGCCCACCGCGCGCCGGG
TCTACCTCGAACCCGACATGCCGCGGGGCGAGGTGGCCCAGCCGGTGCCGCCCGCCGCCGCCGAGCGTGCCTGA

Upstream 100 bases:

>100_bases
CCCGGCGGCGCCCGGAGGTGGCCACCTTGACACACTGGGCCCTCGGTTCGGGCGCCCATCGGCGCGCGGGAGACAGAACA
CGGGACGAGAGCGGGAGCAC

Downstream 100 bases:

>100_bases
TCGCCAAGCCCATCTGATCGCCGAGCCCGCCTGGGCCACGAGGCGTTCGGGCGCGTTCTCCGGCCGGGTCCGCGCAGCTC
AGCCGTTCCCGAGGAAGACC

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: Cation Efflux Family Protein; Cation Transporter; Cation Efflux Protein; Integral Membrane Protein; Membrane Transporter; Co/Zn/Cd Cation Transporter; Cation Diffusion Facilitator Family Protein; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; CDF Family Transporter; Cation-Efflux Pump; Cation Transporter Permease Component; Cation Efflux Transporter; CDF Family Heavy Metal/H(+) Antiporter; Zinc/Cadmium/Cations Transporter; CDF Family Cation Efflux Protein; Cation Transporter Protein; Cation Efflux System

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSTEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNASQPADEEHPFGYGRSRYIAG
FLVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLAVAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPV
VLLEDLAALCGLVFALAGVGLTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAV
TTVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDMPRGEVAQPVPPAAAERA

Sequences:

>Translated_317_residues
MSTEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNASQPADEEHPFGYGRSRYIAG
FLVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLAVAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPV
VLLEDLAALCGLVFALAGVGLTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAV
TTVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDMPRGEVAQPVPPAAAERA
>Mature_316_residues
STEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNASQPADEEHPFGYGRSRYIAGF
LVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLAVAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPVV
LLEDLAALCGLVFALAGVGLTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAVT
TVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDMPRGEVAQPVPPAAAERA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI57164948, Length=269, Percent_Identity=32.7137546468402, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI115534117, Length=269, Percent_Identity=32.3420074349442, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI24653141, Length=240, Percent_Identity=32.0833333333333, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24653143, Length=241, Percent_Identity=31.9502074688797, Blast_Score=125, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33459; Mature: 33328

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCC
SQPADEEHPFGYGRSRYIAGFLVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPVVLLEDLAALCGLVFALAGVG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAV
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHH
TTVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDM
HHHHHHHHHCCCHHHHEEEHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCC
PRGEVAQPVPPAAAERA
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STEGGTKAVVAALLANLGIAVAKFVAFLFTRSSSMLAESIHSVADSSNQALLLLGQRNA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCC
SQPADEEHPFGYGRSRYIAGFLVGIVLFSVGGLFSVYEGVEKLRHPHELESGVVAIVVLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VAIVLESFSFRTAIKESRHLKGSGSWWRFIRDARSPELPVVLLEDLAALCGLVFALAGVG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LTLLLDEPLWDGAGTLAIGILLLAVAVIVAMETYGMLVGEAATPQTVEAIRRALSSAPAV
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHH
TTVIHMRTLHLGPDELLVAAKIGLDPDLTTAQVAAAINEAEALLRDAVPTARRVYLEPDM
HHHHHHHHHCCCHHHHEEEHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCC
PRGEVAQPVPPAAAERA
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA