| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314017
Identifier: 158314017
GI number: 158314017
Start: 2617237
End: 2618157
Strand: Direct
Name: 158314017
Synonym: Franean1_2183
Alternate gene names: NA
Gene position: 2617237-2618157 (Clockwise)
Preceding gene: 158314016
Following gene: 158314018
Centisome position: 29.14
GC content: 66.99
Gene sequence:
>921_bases ATGTCAGACGAGAATCAGTTCGAGGAATTTCTGAAGTTCCAGCAGGGGATCATCGACGAATTCCGTGTCAACGCAGGGAA AGTTGGCGGGATGTTCGAGGGTTCCACCCTGTGTCTTCTCACCACGACGGGGGCGCGCACCGGCCGGCCCCGCACCCAGC CGCTCGGCCTGATGCAGATCGACGGGCAGGACCTGGTCGTCGCCTCGGCGGCCGGCGCACCGACCCATCCGGCTTGGTAC CACAACATCCGCAAGAACGCGATCGTGACGGTCGAGGCAGGCGATCGCACGTACCGGGCGATCGCCTCGATCCCCCCGCG CGAGGAGCGCGACCGGCTCTTCTCGGAAATCGCCGCGCAGCAGCCGGGGTACGGCGAATACCAGACGAAGACCGATCGGG TCATTCCGGTCGTCGCACTCCATCCGATCGACCTCGATCCCGACCGGGTCAAGCACCTCGGTGACGAACTGGTCGAACTG CACGACTGGCTGCGCGGCGAACTGGCGGACCTGCGCAGGCGGATCGACGACGTGGTCGAGGGCAGGGCGAACGATGTCAC GCCGCAGGCCGAGGGCGGCCACCTGCTCGCCGAACTGCGGTCGCACTGCCTGGACTTCTGCCACGCGCTGAACGTCCACC ACACCGGCGAGGACGTCGGCGCCTTCCCAGTGCTCCGCGAGCGGTTCCCGGCGTTGGAACCGGTGCTGGAGAAGTTCGCC GAGGAGCACAAGGTCGTGGCCGAACTGCAGAACCGGATCAAGGAAGTGGTCGAGGACTTCACTCCCGACCGGGACGATCC GGTGCGGCTGCGAGCGGAGGTGGCGGACCTTGCGGACCGGCTCGAAGCCCACTTCGACGAGGAGGAACGCCAACTCGTCA CCGCGCTGAACGCGATGGGTCCCGCGCCGGTGCGCGGCTGA
Upstream 100 bases:
>100_bases GCGCGCCGCGGTGATAGCTTCCCGACCGTGTCCCGCAGGCGGTGCGCCCGGCCGGTTGCGCGGTGGGCGGGCACAAGATT TCCCAGGGGTTTCCACCTAC
Downstream 100 bases:
>100_bases GCGGTCGAGGGGAGCACGGGCCTGAATCGGCCCATGCTCCCCTGCGTTCCGCTCCTGGAGACAGCTCCTGGAATTTGGCC CCGGCGACGGCGCCCAGCAG
Product: hemerythrin HHE cation binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSDENQFEEFLKFQQGIIDEFRVNAGKVGGMFEGSTLCLLTTTGARTGRPRTQPLGLMQIDGQDLVVASAAGAPTHPAWY HNIRKNAIVTVEAGDRTYRAIASIPPREERDRLFSEIAAQQPGYGEYQTKTDRVIPVVALHPIDLDPDRVKHLGDELVEL HDWLRGELADLRRRIDDVVEGRANDVTPQAEGGHLLAELRSHCLDFCHALNVHHTGEDVGAFPVLRERFPALEPVLEKFA EEHKVVAELQNRIKEVVEDFTPDRDDPVRLRAEVADLADRLEAHFDEEERQLVTALNAMGPAPVRG
Sequences:
>Translated_306_residues MSDENQFEEFLKFQQGIIDEFRVNAGKVGGMFEGSTLCLLTTTGARTGRPRTQPLGLMQIDGQDLVVASAAGAPTHPAWY HNIRKNAIVTVEAGDRTYRAIASIPPREERDRLFSEIAAQQPGYGEYQTKTDRVIPVVALHPIDLDPDRVKHLGDELVEL HDWLRGELADLRRRIDDVVEGRANDVTPQAEGGHLLAELRSHCLDFCHALNVHHTGEDVGAFPVLRERFPALEPVLEKFA EEHKVVAELQNRIKEVVEDFTPDRDDPVRLRAEVADLADRLEAHFDEEERQLVTALNAMGPAPVRG >Mature_305_residues SDENQFEEFLKFQQGIIDEFRVNAGKVGGMFEGSTLCLLTTTGARTGRPRTQPLGLMQIDGQDLVVASAAGAPTHPAWYH NIRKNAIVTVEAGDRTYRAIASIPPREERDRLFSEIAAQQPGYGEYQTKTDRVIPVVALHPIDLDPDRVKHLGDELVELH DWLRGELADLRRRIDDVVEGRANDVTPQAEGGHLLAELRSHCLDFCHALNVHHTGEDVGAFPVLRERFPALEPVLEKFAE EHKVVAELQNRIKEVVEDFTPDRDDPVRLRAEVADLADRLEAHFDEEERQLVTALNAMGPAPVRG
Specific function: May be involved in the activation of oxazole analogs [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deazaflavin-dependent nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004378 [H]
Pfam domain/function: PF04075 DUF385 [H]
EC number: NA
Molecular weight: Translated: 34238; Mature: 34107
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDENQFEEFLKFQQGIIDEFRVNAGKVGGMFEGSTLCLLTTTGARTGRPRTQPLGLMQI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCEEEE DGQDLVVASAAGAPTHPAWYHNIRKNAIVTVEAGDRTYRAIASIPPREERDRLFSEIAAQ CCCCEEEEECCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHC QPGYGEYQTKTDRVIPVVALHPIDLDPDRVKHLGDELVELHDWLRGELADLRRRIDDVVE CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRANDVTPQAEGGHLLAELRSHCLDFCHALNVHHTGEDVGAFPVLRERFPALEPVLEKFA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHH EEHKVVAELQNRIKEVVEDFTPDRDDPVRLRAEVADLADRLEAHFDEEERQLVTALNAMG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC PAPVRG CCCCCC >Mature Secondary Structure SDENQFEEFLKFQQGIIDEFRVNAGKVGGMFEGSTLCLLTTTGARTGRPRTQPLGLMQI CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCEEEE DGQDLVVASAAGAPTHPAWYHNIRKNAIVTVEAGDRTYRAIASIPPREERDRLFSEIAAQ CCCCEEEEECCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHC QPGYGEYQTKTDRVIPVVALHPIDLDPDRVKHLGDELVELHDWLRGELADLRRRIDDVVE CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRANDVTPQAEGGHLLAELRSHCLDFCHALNVHHTGEDVGAFPVLRERFPALEPVLEKFA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHH EEHKVVAELQNRIKEVVEDFTPDRDDPVRLRAEVADLADRLEAHFDEEERQLVTALNAMG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC PAPVRG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]