| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314012
Identifier: 158314012
GI number: 158314012
Start: 2612271
End: 2612564
Strand: Direct
Name: 158314012
Synonym: Franean1_2178
Alternate gene names: NA
Gene position: 2612271-2612564 (Clockwise)
Preceding gene: 158314011
Following gene: 158314016
Centisome position: 29.08
GC content: 70.75
Gene sequence:
>294_bases GTGCCCACGTACGAGCAGGTGGCCCGCTTCATGGCGGAGTACGCGCGGCTGACTCCCGAGCAGCGGCGAGCGTTCCGCCG CGCGGTCGCACTGTTCCGTGAGGGCCTGGAGACGGGCCAGTTTCACCCAAGCCTCGGGGTGAAGGGCTTCCGCTCCGAGC CGGGCGTGTTCGAACTGCGGTGGGCGAAGGACGGCCGGGCCCTGTGGGAGTACGGCGAGCCCGTTCCGGGCCGCGACGGC CCGCATGTCCGCTGGCTGCGGATCGGCACCCACGACATCTACAAGAGCCGGTAA
Upstream 100 bases:
>100_bases CCCTCCTCGACCAGCTGGCCGCCGAGGAGCACCCCAAGGCAAGCTGAGTAGCCGCGACCTCCTCACCAGGGCAGGCCGAT CACCGCACTATCGTGACCAC
Downstream 100 bases:
>100_bases CCGCTGCCTTGAAAGGGCGACGGACACCCGACCGTTGCACCCCTCCTTACCTGGGCTTTCGTCATGCGGCGATCGACCGG CGACCGAGTTTCGGCACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MPTYEQVARFMAEYARLTPEQRRAFRRAVALFREGLETGQFHPSLGVKGFRSEPGVFELRWAKDGRALWEYGEPVPGRDG PHVRWLRIGTHDIYKSR
Sequences:
>Translated_97_residues MPTYEQVARFMAEYARLTPEQRRAFRRAVALFREGLETGQFHPSLGVKGFRSEPGVFELRWAKDGRALWEYGEPVPGRDG PHVRWLRIGTHDIYKSR >Mature_96_residues PTYEQVARFMAEYARLTPEQRRAFRRAVALFREGLETGQFHPSLGVKGFRSEPGVFELRWAKDGRALWEYGEPVPGRDGP HVRWLRIGTHDIYKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11347; Mature: 11216
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTYEQVARFMAEYARLTPEQRRAFRRAVALFREGLETGQFHPSLGVKGFRSEPGVFELR CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE WAKDGRALWEYGEPVPGRDGPHVRWLRIGTHDIYKSR ECCCCCCHHHCCCCCCCCCCCCEEEEECCCHHHHCCC >Mature Secondary Structure PTYEQVARFMAEYARLTPEQRRAFRRAVALFREGLETGQFHPSLGVKGFRSEPGVFELR CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE WAKDGRALWEYGEPVPGRDGPHVRWLRIGTHDIYKSR ECCCCCCHHHCCCCCCCCCCCCEEEEECCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA