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The map label for this gene is capF [H]

Identifier: 158313978

GI number: 158313978

Start: 2574072

End: 2575235

Strand: Direct

Name: capF [H]

Synonym: Franean1_2144

Alternate gene names: 158313978

Gene position: 2574072-2575235 (Clockwise)

Preceding gene: 158313977

Following gene: 158313979

Centisome position: 28.66

GC content: 59.62

Gene sequence:

>1164_bases
ATGTTGCGGGTCTGGTGTCTTTCCTTCTGTCTGGCTGGAGTGATCGGCGTTGCGGCCGTAGCCTGCGATTCTGGGTATGA
TGCGACACTGATCGCGGCTGTTACCCTGGCCAAGGTGTTCGACTCCATATCCGACATAATTTATGGATTGCTACAGAAGT
ATGAAATGATGGGCCGGGTGGCGCTGTCGAGATCCGCACAGGGGATCTGCCAGTTCTTGGCTCTTTTCGTTACACTCCGG
TTCTCTGACGACCTGCTTTTGGTCACTGTGGCCTGGGCCGCGATGTCCGCAGTCGTCACTGTCTCCTACGACATCAGGTC
GGTGGCCGTCGTTCGGCGGCGATATCCCCAGGAGCTGCAGTCGTCAGACGGGGCCGCTTCCCTCAGAGCGGCACGCAAGC
TTTTCAGGATCTCTCTGCCACTGGCGGGAACGGCAGTCCTCGGGTCCATCATCGGAAATCTTCCGGTGTACGCACTGAAA
CACTGGCGCTCGGTGCGCGAGGTAGGAGTTTACTCGGCTCAGCAGCGATTCATCACTGTTATTGGGCTTACCTTCGCCGC
CTTGGTTCAGGTTGTGATGCCAAGGCTTGCCCATCAGTTCAACGAGAGCCGCGACAGGTTTCGTGGACTACTAGTGAAGC
TGATCATTGCAGCACTCCTGAACGCCGGGGTAGGGCTCGCGTTCGGCCTGGTCGCCGGCGAGGCGCTCCTTCGACTGATC
TATGGTCCTGAATATACTGACGTCGCGCTGTTCACAATTCTTGTCGCCGCAATGGGCGTGGCCCTGCTGTCGGTGGTGCT
CGGAATGGCCGCTACCGCGGCGCGGATTTTCAAGATTCAGTTCTGGGCTGGTATTGCACAACTGGCAGTCACGGTCGTTG
TGCTCGTTCTACTCACCCCGAAAATCGGATTGAAGGGCGCTGCGACCGCGTCTCTCGCAGGGGTCGTCGCCTACACCGGG
CTGATGGTTCCGGCCCTGCTGCGGAGTGTGGCGGCGGCTGGCCAGAAGCCCCCACTGTCCGAGAACCCAGCCATCGAGGT
GCCGGCGCAGAGAGCTTTTGGCAGCCAACTGCCTGATGAATCGCCTCGTAGGAATCTGAGGCCGACTCTCGTCGTCCAGC
CACGATCGCGACGCCATGGACGGCATCGATATCGACGACGGTGA

Upstream 100 bases:

>100_bases
GCTCGCGGTCACGTCGCCGCCCATCATATTTGCAAATCTTAACCTCAGAATTGTCATAGCAACAGACGTGCGTTCTACGT
TTACCTTTCGTGACTATCTC

Downstream 100 bases:

>100_bases
CACCGAGAGTAGAGCGCCGGTCGGATAGTCAGGCTGCTTGCTGATCGTTTTTCTGGCGGGCGATGACGTGGAGGCCGTGG
ACGACGGCGGTGCGGCGCAG

Product: O-antigen and teichoic acid-like export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MLRVWCLSFCLAGVIGVAAVACDSGYDATLIAAVTLAKVFDSISDIIYGLLQKYEMMGRVALSRSAQGICQFLALFVTLR
FSDDLLLVTVAWAAMSAVVTVSYDIRSVAVVRRRYPQELQSSDGAASLRAARKLFRISLPLAGTAVLGSIIGNLPVYALK
HWRSVREVGVYSAQQRFITVIGLTFAALVQVVMPRLAHQFNESRDRFRGLLVKLIIAALLNAGVGLAFGLVAGEALLRLI
YGPEYTDVALFTILVAAMGVALLSVVLGMAATAARIFKIQFWAGIAQLAVTVVVLVLLTPKIGLKGAATASLAGVVAYTG
LMVPALLRSVAAAGQKPPLSENPAIEVPAQRAFGSQLPDESPRRNLRPTLVVQPRSRRHGRHRYRRR

Sequences:

>Translated_387_residues
MLRVWCLSFCLAGVIGVAAVACDSGYDATLIAAVTLAKVFDSISDIIYGLLQKYEMMGRVALSRSAQGICQFLALFVTLR
FSDDLLLVTVAWAAMSAVVTVSYDIRSVAVVRRRYPQELQSSDGAASLRAARKLFRISLPLAGTAVLGSIIGNLPVYALK
HWRSVREVGVYSAQQRFITVIGLTFAALVQVVMPRLAHQFNESRDRFRGLLVKLIIAALLNAGVGLAFGLVAGEALLRLI
YGPEYTDVALFTILVAAMGVALLSVVLGMAATAARIFKIQFWAGIAQLAVTVVVLVLLTPKIGLKGAATASLAGVVAYTG
LMVPALLRSVAAAGQKPPLSENPAIEVPAQRAFGSQLPDESPRRNLRPTLVVQPRSRRHGRHRYRRR
>Mature_387_residues
MLRVWCLSFCLAGVIGVAAVACDSGYDATLIAAVTLAKVFDSISDIIYGLLQKYEMMGRVALSRSAQGICQFLALFVTLR
FSDDLLLVTVAWAAMSAVVTVSYDIRSVAVVRRRYPQELQSSDGAASLRAARKLFRISLPLAGTAVLGSIIGNLPVYALK
HWRSVREVGVYSAQQRFITVIGLTFAALVQVVMPRLAHQFNESRDRFRGLLVKLIIAALLNAGVGLAFGLVAGEALLRLI
YGPEYTDVALFTILVAAMGVALLSVVLGMAATAARIFKIQFWAGIAQLAVTVVVLVLLTPKIGLKGAATASLAGVVAYTG
LMVPALLRSVAAAGQKPPLSENPAIEVPAQRAFGSQLPDESPRRNLRPTLVVQPRSRRHGRHRYRRR

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 41669; Mature: 41669

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01319 RBFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure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CCCCCCCCEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]