| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313969
Identifier: 158313969
GI number: 158313969
Start: 2564408
End: 2564836
Strand: Direct
Name: 158313969
Synonym: Franean1_2135
Alternate gene names: NA
Gene position: 2564408-2564836 (Clockwise)
Preceding gene: 158313968
Following gene: 158313970
Centisome position: 28.55
GC content: 72.49
Gene sequence:
>429_bases GTGAACGCGCTGGACGAAGCCGGTCAGGTACAGGCGGCGCCGCCCCCGGCTGCCGCCCGCAGCCGGAACAGGATCTTCCT GGTCGTGGGCCTGTTCGTTGCCTTCGTGCTCGCCGGGTTCGTGTCCGGCTACGCCAGCTCCAGCCCGGACGGGCTGGAGA AGGTCGCCGAGGAGAAGGGATTCCTGGACCAGGCGGAGCACCACTCGTTCGCCGACTGGCCGCTCGCGGACTACGCCGTG TCCGGGATCGACAACGAGCGTCTCGCCGGCGGTGTCGCCGGGATCATCGGAGTGTCGATCGCCTTCGTTGTCGGTGGTGT CGTCGTCCTCGGCGTAGTGCGGCTGCGGCCGCGTGCCTCCGAGCGGCGGCCGCCGCTCGCGGACGGGCGGGGGACCGGTG GCGGAGCCGGAACCGCCCCGGCCGCCTGA
Upstream 100 bases:
>100_bases CGGCGCCGAGGAGCGCCCCGGCGGCCGCGACGACCGAAACGGCCATGACCGAAGCCGCGGCGGCGCCCGCCGCGGGCGGC TGGGGACGAGGGGAGCGAGC
Downstream 100 bases:
>100_bases CCTCCGCCGAGAGCTGGCCGCGTCATGGGCGGTGCGCACATCCTCGACCCGTACCGGCCGGGCCACACGATCCCGCACCG GCTGCCTGCTCAGTGCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNALDEAGQVQAAPPPAAARSRNRIFLVVGLFVAFVLAGFVSGYASSSPDGLEKVAEEKGFLDQAEHHSFADWPLADYAV SGIDNERLAGGVAGIIGVSIAFVVGGVVVLGVVRLRPRASERRPPLADGRGTGGGAGTAPAA
Sequences:
>Translated_142_residues MNALDEAGQVQAAPPPAAARSRNRIFLVVGLFVAFVLAGFVSGYASSSPDGLEKVAEEKGFLDQAEHHSFADWPLADYAV SGIDNERLAGGVAGIIGVSIAFVVGGVVVLGVVRLRPRASERRPPLADGRGTGGGAGTAPAA >Mature_142_residues MNALDEAGQVQAAPPPAAARSRNRIFLVVGLFVAFVLAGFVSGYASSSPDGLEKVAEEKGFLDQAEHHSFADWPLADYAV SGIDNERLAGGVAGIIGVSIAFVVGGVVVLGVVRLRPRASERRPPLADGRGTGGGAGTAPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14423; Mature: 14423
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALDEAGQVQAAPPPAAARSRNRIFLVVGLFVAFVLAGFVSGYASSSPDGLEKVAEEKG CCCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC FLDQAEHHSFADWPLADYAVSGIDNERLAGGVAGIIGVSIAFVVGGVVVLGVVRLRPRAS CHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ERRPPLADGRGTGGGAGTAPAA CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNALDEAGQVQAAPPPAAARSRNRIFLVVGLFVAFVLAGFVSGYASSSPDGLEKVAEEKG CCCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC FLDQAEHHSFADWPLADYAVSGIDNERLAGGVAGIIGVSIAFVVGGVVVLGVVRLRPRAS CHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ERRPPLADGRGTGGGAGTAPAA CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA