Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313887

Identifier: 158313887

GI number: 158313887

Start: 2471848

End: 2473143

Strand: Direct

Name: 158313887

Synonym: Franean1_2052

Alternate gene names: NA

Gene position: 2471848-2473143 (Clockwise)

Preceding gene: 158313884

Following gene: 158313888

Centisome position: 27.52

GC content: 77.47

Gene sequence:

>1296_bases
ATGTCCACGAAGGACGGCTCCCGCCCCACGGCGCTGCCGCCGATCGCAGTGCGCCCAGGCCTGTTCGTGTCCGTGGCGGT
CGTGACAGTGCTGCTCGGCGCGCTCACCCTCCCCGCCACCGTGCCGGGCCGTCCGGGCTTCGCCTACTTCAGCGGGGGCG
TGCTCGGCGCGGGTCTGCTCGTCGCGATCCTGCTCGGGGCCGACCTGGCCCGGGCCGCCGCCGCGCGCAGGGCCGGGATC
ACGGTCACCGGGATCACCCTCGGCGCCTTCGGGAGCCGGCTGGGCCTCGCACCCGCACGCGACCGCTCGACGGACCGGGG
TGACGGCAGCCCGCTGAGCGGTACCGGCCCGTCGGGCGGTAGCGCCCCGTTGGGCGGTACCGGCCCGGCCGGTTCCGATG
ACCCGCTCGCCCCGGCCACCGGTGACGCACTCGCCGACGCCGCCGTCGCCCGTGCGGGCCTGATGGTGACGGCCCTCGCC
GGGATGGTGCTGGTCGCCGCCGGCGCGTTCGCCCCCGGCGGAACGCTCGCCCTGGTCGGCGAGCTGGCGCTCTGGGTCGG
CACGTTCGCCCTGCTCATCACCGTCGTCGACCTGCTGCCCGCACCGCGCAGCGCCGGCGGGCGGATCCTCGCCGCCCGGG
TCCTGCGCCGCACCGGTGACGAGGCGGCCGCGGGCGCGGCCGTGGCCCGCGCGGGTGTCATCACCGGGTGGACCCTGATC
GTCTTCGGTGCGGCGGCCACCTTCCTGGTCGGGCTGGTCGGCCTGTGGGCGATTCTCCTCGGCTGGCTCGCGCTCGGGAC
GTCCCGGCTCGCGCAGACGCAGGAGCGCACCTCCGCCGCGCTGCGCGGGGTCTTCGTCCGTGACGTGATGATCCCCGCCC
CGGAGGCGCTGCCGTCCTGGAAGACAGTCGCCGCCGCGCTGGACGAGACCGTGCTCCCGTCCCGCGCCTCGGTGTTCGGG
GTCCGGGACTTCGCCGGGCCGCTGATCGGCGTCACCCTGCTGCGTGATCTGGCCGCGGTGCCCGCGGACGACCGCGACCT
GGCCCGGGTGGCCCGGGTGACCATCCCGCTGGACCGGGTCGCCACCGCCCGTCCGGAGGAGCCGCTCGCCGCGGTCGCGT
CGCGGCTGGCGCACCGGCCCGCCGCGGGCGTGATCGTCGTCGTCGCCGACGGCCCGGATGGCCTGCCCGGGATGGTGGGC
ACCGTGGGCCCGGGCGAACTGGCCCGGGCGCTGGAGACCACGCCGCTGCACGGCCGGGTGGTCATCCCGACCGGCTTCGG
CCGCCGCCGCCGGTGA

Upstream 100 bases:

>100_bases
CCCGGCGCCGCGATCATCGCCCAGCCCAGGTGCCACCACGGCAACACAAAGCCCCCGACGGAAGTGACTGACGGTGAAAG
GCAAAGGATCTACCCGAGAC

Downstream 100 bases:

>100_bases
GCTCACCGGTCGCGCCGAGAGCCCGGTCCCGCCGGGTTCCCGGCGGACGTCCCCGCCGTCGCCGGGCCTGAGCGGCCCCC
TCGGCGCGCGGGCCCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MSTKDGSRPTALPPIAVRPGLFVSVAVVTVLLGALTLPATVPGRPGFAYFSGGVLGAGLLVAILLGADLARAAAARRAGI
TVTGITLGAFGSRLGLAPARDRSTDRGDGSPLSGTGPSGGSAPLGGTGPAGSDDPLAPATGDALADAAVARAGLMVTALA
GMVLVAAGAFAPGGTLALVGELALWVGTFALLITVVDLLPAPRSAGGRILAARVLRRTGDEAAAGAAVARAGVITGWTLI
VFGAAATFLVGLVGLWAILLGWLALGTSRLAQTQERTSAALRGVFVRDVMIPAPEALPSWKTVAAALDETVLPSRASVFG
VRDFAGPLIGVTLLRDLAAVPADDRDLARVARVTIPLDRVATARPEEPLAAVASRLAHRPAAGVIVVVADGPDGLPGMVG
TVGPGELARALETTPLHGRVVIPTGFGRRRR

Sequences:

>Translated_431_residues
MSTKDGSRPTALPPIAVRPGLFVSVAVVTVLLGALTLPATVPGRPGFAYFSGGVLGAGLLVAILLGADLARAAAARRAGI
TVTGITLGAFGSRLGLAPARDRSTDRGDGSPLSGTGPSGGSAPLGGTGPAGSDDPLAPATGDALADAAVARAGLMVTALA
GMVLVAAGAFAPGGTLALVGELALWVGTFALLITVVDLLPAPRSAGGRILAARVLRRTGDEAAAGAAVARAGVITGWTLI
VFGAAATFLVGLVGLWAILLGWLALGTSRLAQTQERTSAALRGVFVRDVMIPAPEALPSWKTVAAALDETVLPSRASVFG
VRDFAGPLIGVTLLRDLAAVPADDRDLARVARVTIPLDRVATARPEEPLAAVASRLAHRPAAGVIVVVADGPDGLPGMVG
TVGPGELARALETTPLHGRVVIPTGFGRRRR
>Mature_430_residues
STKDGSRPTALPPIAVRPGLFVSVAVVTVLLGALTLPATVPGRPGFAYFSGGVLGAGLLVAILLGADLARAAAARRAGIT
VTGITLGAFGSRLGLAPARDRSTDRGDGSPLSGTGPSGGSAPLGGTGPAGSDDPLAPATGDALADAAVARAGLMVTALAG
MVLVAAGAFAPGGTLALVGELALWVGTFALLITVVDLLPAPRSAGGRILAARVLRRTGDEAAAGAAVARAGVITGWTLIV
FGAAATFLVGLVGLWAILLGWLALGTSRLAQTQERTSAALRGVFVRDVMIPAPEALPSWKTVAAALDETVLPSRASVFGV
RDFAGPLIGVTLLRDLAAVPADDRDLARVARVTIPLDRVATARPEEPLAAVASRLAHRPAAGVIVVVADGPDGLPGMVGT
VGPGELARALETTPLHGRVVIPTGFGRRRR

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 43010; Mature: 42878

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKDGSRPTALPPIAVRPGLFVSVAVVTVLLGALTLPATVPGRPGFAYFSGGVLGAGLL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHH
VAILLGADLARAAAARRAGITVTGITLGAFGSRLGLAPARDRSTDRGDGSPLSGTGPSGG
HHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAPLGGTGPAGSDDPLAPATGDALADAAVARAGLMVTALAGMVLVAAGAFAPGGTLALVG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELALWVGTFALLITVVDLLPAPRSAGGRILAARVLRRTGDEAAAGAAVARAGVITGWTLI
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VFGAAATFLVGLVGLWAILLGWLALGTSRLAQTQERTSAALRGVFVRDVMIPAPEALPSW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
KTVAAALDETVLPSRASVFGVRDFAGPLIGVTLLRDLAAVPADDRDLARVARVTIPLDRV
HHHHHHHHHHHCCCCHHHEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
ATARPEEPLAAVASRLAHRPAAGVIVVVADGPDGLPGMVGTVGPGELARALETTPLHGRV
HCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE
VIPTGFGRRRR
EEECCCCCCCC
>Mature Secondary Structure 
STKDGSRPTALPPIAVRPGLFVSVAVVTVLLGALTLPATVPGRPGFAYFSGGVLGAGLL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHH
VAILLGADLARAAAARRAGITVTGITLGAFGSRLGLAPARDRSTDRGDGSPLSGTGPSGG
HHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAPLGGTGPAGSDDPLAPATGDALADAAVARAGLMVTALAGMVLVAAGAFAPGGTLALVG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELALWVGTFALLITVVDLLPAPRSAGGRILAARVLRRTGDEAAAGAAVARAGVITGWTLI
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VFGAAATFLVGLVGLWAILLGWLALGTSRLAQTQERTSAALRGVFVRDVMIPAPEALPSW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
KTVAAALDETVLPSRASVFGVRDFAGPLIGVTLLRDLAAVPADDRDLARVARVTIPLDRV
HHHHHHHHHHHCCCCHHHEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
ATARPEEPLAAVASRLAHRPAAGVIVVVADGPDGLPGMVGTVGPGELARALETTPLHGRV
HCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE
VIPTGFGRRRR
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]