| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is acoC [H]
Identifier: 158313859
GI number: 158313859
Start: 2431996
End: 2432985
Strand: Direct
Name: acoC [H]
Synonym: Franean1_2024
Alternate gene names: 158313859
Gene position: 2431996-2432985 (Clockwise)
Preceding gene: 158313857
Following gene: 158313860
Centisome position: 27.08
GC content: 76.26
Gene sequence:
>990_bases ATGAGCGACAGCACGGGCACAGGTGACAGCACGGGCACAGGTGACAGCGCGGGCGCGAGCGGCGAGGCTGGCATGGTCTC GAAGTGGGTCGACCTGGACGGCCCCGTGCACTACGCGGAGTTCGGCGCGCCCGGAACCATCGGCGGGAGCCCGCCGGTGG TGTGCGTCCACGGCCTCGGCGGGTCGTACACCAACTGGCTCGCGCTGGCCCCCCTGCTCGCCTCGACGTCCCGCGTGCTC GCGCCCGACCTCGCCGGCCACGGCCGCACCCCGCTCGGCAACCGCGGTGCCGACGTGTCGGCGAACCACCTCCTGCTGGA CCGCTTCCTGGCCGAGGTCGTGGGGGAGCCGGTGATCCTCGTCGGGAACTCGATGGGCGGTCTGATCAGCATGCTGCAGG CGGTCCGTCGCCCGGAGTCGGTGTGCGGGCTGGTCCTGCTGGATCCCGCGCTGCCGCTGCGCCGCGGCGGCTGGCCGGAG CCGCTGGTCGTCGCGTCGTTCGCCGCCGTGGTCCTCCCGGGACTCGGGGCGTGGGTGCTCGCCCGGCGCCGCGCCCGGGT CGGCCCCGCCGGCATCGTGGCCCAGACCCTGCGCCTCTGCACGACGGATCCCGCCCGGATCCCGTCCGTCGCGGTCGAGG CACTGGTCGACCTCGGCCAGGAGCGGGCGGGCATGGACGGGGTCGAGCGCGCCTATGTCGCCGCCGCCCGGTCCGTGGTG CGCCGGGTCGTCCGCGGCGGCCCGCTGCGGCGGCTGATCCGCCAGGTGGACGTCCCGACGCTGCTCGTGCACGGGTCGGA CGACCGGCTCATCCCGGTGGCGCTGGCCCGGGACGCCGCCGGCCTGCGTCCCGACTGGCAGCTGGCGGTCGTCGCCGGCT GCGGGCACCTGCCCCAGCTCGAGGACGCGGCCGGGACGGCCGGGCTCCTGACGGGATGGTGGGAGCAGACGCGGGACGCC AGCGGCGGCGCGCGGAAAGCAGTGGCGTGA
Upstream 100 bases:
>100_bases CGGGTGTCGTCCACCGGCGATGCCGGTTCCGGCTCCGGACGGCGCACTAGGCGCCTAACGTCGTTCCGACCGGCGATCGA GCATGGGGGCTTGCCGAGGC
Downstream 100 bases:
>100_bases GGCCGCGGAACTGACGGGCCGAGGATCGGGTCTGGCCGGCCGAGGGGTTGTCGTGTGGGTTTTCTCGCATCACCCCGGCT GTTCCGCCCGACGCCGCCGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Acetoin dehydrogenase E2 component; Dihydrolipoamide acetyltransferase component of acetoin cleaving system [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLGGSYTNWLALAPLLASTSRVL APDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVILVGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPE PLVVASFAAVVLPGLGAWVLARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVV RRVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQLEDAAGTAGLLTGWWEQTRDA SGGARKAVA
Sequences:
>Translated_329_residues MSDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLGGSYTNWLALAPLLASTSRVL APDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVILVGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPE PLVVASFAAVVLPGLGAWVLARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVV RRVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQLEDAAGTAGLLTGWWEQTRDA SGGARKAVA >Mature_328_residues SDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLGGSYTNWLALAPLLASTSRVLA PDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVILVGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPEP LVVASFAAVVLPGLGAWVLARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVVR RVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQLEDAAGTAGLLTGWWEQTRDAS GGARKAVA
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 lipoyl-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003016 - InterPro: IPR000073 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF00364 Biotin_lipoyl [H]
EC number: =2.3.1.12 [H]
Molecular weight: Translated: 33878; Mature: 33747
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEHHCCCCCCCCCCCCEEEEECCC GSYTNWLALAPLLASTSRVLAPDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVIL CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE VGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPEPLVVASFAAVVLPGLGAWVL EECCHHHHHHHHHHHHCHHHHCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHCCCHHHHH ARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVV HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RRVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQL HHHHCCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCC EDAAGTAGLLTGWWEQTRDASGGARKAVA HHHCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLG CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEHHCCCCCCCCCCCCEEEEECCC GSYTNWLALAPLLASTSRVLAPDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVIL CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE VGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPEPLVVASFAAVVLPGLGAWVL EECCHHHHHHHHHHHHCHHHHCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHCCCHHHHH ARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVV HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RRVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQL HHHHCCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCC EDAAGTAGLLTGWWEQTRDASGGARKAVA HHHCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7813883 [H]