| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313790
Identifier: 158313790
GI number: 158313790
Start: 2352208
End: 2353137
Strand: Direct
Name: 158313790
Synonym: Franean1_1955
Alternate gene names: NA
Gene position: 2352208-2353137 (Clockwise)
Preceding gene: 158313787
Following gene: 158313797
Centisome position: 26.19
GC content: 73.98
Gene sequence:
>930_bases ATGCGTCTTTCTTCATCCACCCACGGCCGTTTGGCGATGTGCCGGGCGGGGATCACCCATCGACGGCTCCGGGCGGTTCT CCCGGCCCGGCCCACCGGATTTCCCGAGGCGACGGAATTTGCCGAGACCGGCGGATTCTCCGAGACCGGCGGATTCTCCG AGACCGGCGGATTCGCCGAGACGGCCGGATTCTCCGCGGTGTCGGAATACGGGCCGGAAAAGAAATTCTCCGTGTCGGAC AGGCCTGTCCGCGCCGCGATGTCGTCGAGACTGGTCGAATGTTGTCGGGTCCCTTCCGGGTGCGCGGTCACCGGTGTGCT CGTCACCGGGCTCGCGGTCGGCCTCGCCGTCGGGCTCGGCGCTCCTGCCGCGGCGCTGGCCGTGGCAGCGGCCCGCCCGG TCGAAGCCGTGCCGGCCGACACCGGGCCCGCCGATGCCGGGCCGATCGAGGCCTGCTCACCGGGGGATCTGCTCGCGGAG CTGACCGGCGCGCAGGGCGGCGCGGGCCAGGTGCACGCGGACCTCGTGCTGTCCAACCAGGGCAACGGGGCGTGCGCCCT CGCCGGGTATCCAGCGGTCTTCCAGGTGGATGCGGCCGGCGCCGCCGTGGGGGCGCCGGCGGTGGCCGACGGGCCGCGTG GCCCGTCAGTGATCCTTTGGTCAGGGCAGCGGGCCGCCGCGGGCCTCAGCGGGACCAACGCGGGTCTCGTGGCGGGCCGG TCGGCCGGGGCGGAGGCCGCCGGCATGTCGGTCATCCCGCCTGGCGGGGACGGTGTGCTCAAGGTCGCCGGGTTCACCGA GGCCGGCGGGTTCTCCGCGGGGGAGTGGGCCGCACTGCGCGTCACAGCGCTCCGGCCGTTCCCCGGCGACCCGTTCCCCG GAGACCCGATCCCCGACCACACGCTCACCGGGGCTCACCCGTCCACCTGA
Upstream 100 bases:
>100_bases CCACCGGACGGGTGTGGCGCGGCCTCCGGCGGGGAACATGATCGGCACGCGGCGGCATGCCGGTGCGGAGCCCACAGATC GGGGGATCCGGGAGGGCGTC
Downstream 100 bases:
>100_bases CGTCGTGCCCGGCCACCGGTCCGGCCTGCGATCGGGTGCGCGCGGGTGCGGCGACGGCGACGTCCGCGGGGTCACCACTC TGCTCGTGGTGACCCCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MRLSSSTHGRLAMCRAGITHRRLRAVLPARPTGFPEATEFAETGGFSETGGFSETGGFAETAGFSAVSEYGPEKKFSVSD RPVRAAMSSRLVECCRVPSGCAVTGVLVTGLAVGLAVGLGAPAAALAVAAARPVEAVPADTGPADAGPIEACSPGDLLAE LTGAQGGAGQVHADLVLSNQGNGACALAGYPAVFQVDAAGAAVGAPAVADGPRGPSVILWSGQRAAAGLSGTNAGLVAGR SAGAEAAGMSVIPPGGDGVLKVAGFTEAGGFSAGEWAALRVTALRPFPGDPFPGDPIPDHTLTGAHPST
Sequences:
>Translated_309_residues MRLSSSTHGRLAMCRAGITHRRLRAVLPARPTGFPEATEFAETGGFSETGGFSETGGFAETAGFSAVSEYGPEKKFSVSD RPVRAAMSSRLVECCRVPSGCAVTGVLVTGLAVGLAVGLGAPAAALAVAAARPVEAVPADTGPADAGPIEACSPGDLLAE LTGAQGGAGQVHADLVLSNQGNGACALAGYPAVFQVDAAGAAVGAPAVADGPRGPSVILWSGQRAAAGLSGTNAGLVAGR SAGAEAAGMSVIPPGGDGVLKVAGFTEAGGFSAGEWAALRVTALRPFPGDPFPGDPIPDHTLTGAHPST >Mature_309_residues MRLSSSTHGRLAMCRAGITHRRLRAVLPARPTGFPEATEFAETGGFSETGGFSETGGFAETAGFSAVSEYGPEKKFSVSD RPVRAAMSSRLVECCRVPSGCAVTGVLVTGLAVGLAVGLGAPAAALAVAAARPVEAVPADTGPADAGPIEACSPGDLLAE LTGAQGGAGQVHADLVLSNQGNGACALAGYPAVFQVDAAGAAVGAPAVADGPRGPSVILWSGQRAAAGLSGTNAGLVAGR SAGAEAAGMSVIPPGGDGVLKVAGFTEAGGFSAGEWAALRVTALRPFPGDPFPGDPIPDHTLTGAHPST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30221; Mature: 30221
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSSSTHGRLAMCRAGITHRRLRAVLPARPTGFPEATEFAETGGFSETGGFSETGGFAE CCCCCCCCCCEEEHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHH TAGFSAVSEYGPEKKFSVSDRPVRAAMSSRLVECCRVPSGCAVTGVLVTGLAVGLAVGLG HHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC APAAALAVAAARPVEAVPADTGPADAGPIEACSPGDLLAELTGAQGGAGQVHADLVLSNQ CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECC GNGACALAGYPAVFQVDAAGAAVGAPAVADGPRGPSVILWSGQRAAAGLSGTNAGLVAGR CCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECC SAGAEAAGMSVIPPGGDGVLKVAGFTEAGGFSAGEWAALRVTALRPFPGDPFPGDPIPDH CCCCHHCCCEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC TLTGAHPST CCCCCCCCC >Mature Secondary Structure MRLSSSTHGRLAMCRAGITHRRLRAVLPARPTGFPEATEFAETGGFSETGGFSETGGFAE CCCCCCCCCCEEEHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHH TAGFSAVSEYGPEKKFSVSDRPVRAAMSSRLVECCRVPSGCAVTGVLVTGLAVGLAVGLG HHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC APAAALAVAAARPVEAVPADTGPADAGPIEACSPGDLLAELTGAQGGAGQVHADLVLSNQ CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECC GNGACALAGYPAVFQVDAAGAAVGAPAVADGPRGPSVILWSGQRAAAGLSGTNAGLVAGR CCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECC SAGAEAAGMSVIPPGGDGVLKVAGFTEAGGFSAGEWAALRVTALRPFPGDPFPGDPIPDH CCCCHHCCCEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC TLTGAHPST CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA