| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mutA [H]
Identifier: 158313778
GI number: 158313778
Start: 2333391
End: 2335352
Strand: Direct
Name: mutA [H]
Synonym: Franean1_1943
Alternate gene names: 158313778
Gene position: 2333391-2335352 (Clockwise)
Preceding gene: 158313777
Following gene: 158313779
Centisome position: 25.98
GC content: 76.2
Gene sequence:
>1962_bases ATGACCGTTCCACCGGTGGAGCTGGCGCTCGCCGCCGATTTTCCGGACTCGACGAGGGACGACTGGCGGCGGCTGGTCCT CGGGGTGCTGCGAAAGTCGGGGGTTGCGGGCGAGGACACCGCTCCGGGTGAGGCTGAGGAGCTGATCGCGACCTCGACCT ACGAGGGCATCCGCATCCGTCCGCTCTACGACGCGGCGGACGCCGCCGGCGCGGCCGGCGCGGGCCTGCCGGGGCTGGCG CCGTTCGTCCGCGGCGGCCGGCCACAGGGCGCCAACACCGACGGCTGGGACGTCCGTGCGCTGCACGCCCACCCCGGCCC GAAGGCCGGCGGCCAGGCGGTGCTCGCCGACCTGGAGAACGGCGTCACCTCGCTGTGGCTGCGGCTCGGTCCGGCGGGCC TGCCTCTCGACGGGCTCGCCGAGATCCTGCGGGATGTCTACCTCGACCTCGCTCCGGTCGTCCTGGACGCGGGCACGCTC ACCGGGGAGGCGGTCGCCGCGTTCCTGGCGCTGGCCGACGAGCGGGGTGTTCCGGCGTCCCAGCTCACCGGCGTGCTCGG CGCGGACCCGCTGGGGCTCGCGGCGCGCACCGGGGCGGCGCCGGACTTCAGCGTGGCCCGCGCGCTCGCCCCACGCGTCG CCGCCGAGTACCCACGCCTGCGGACGCTGGTCGTCGACGCCCGGCCGTACCACGACGCCGGCGGGAGCGACGCCGAGGAG CTCGGCGCCTCGTTGGCGACCGGTGTGGCCTACCTGCGCGAGCTGACCGACGCCGGGCTGGGCGTGGCCGAGGCCCTCGG CCAGCTCGAGTTCCGCTACGCGGTGAGCGCCGACCAGTTCCTGTCGATCGCCAAGCTGCGGGCGGCGCGGCGGCTGTGGG CCCGGGTGGCGGAGGTGTGCGGTGCCGCGCCCGCGGAGCGGGTGCAGCGTCAGCACGCGGTCACCTCGTCCGCGATGATG TCCCGCCGTGACCCCTGGGTGAACATGCTCCGCACCACCGTGGCCTGCTTCGCGGCGGGGGTCGGCGGCGCGGACGCGGT CACCGTGCTGCCCTTCGACGTCAGGCTCGGGCTCGCCGACGACTTCGCCCGTCGGATCGCGCGGAACACGCAGACGCTGC TGCAGGAAGAGTCGAGCCTGATCCGGGTGATCGACCCGGCCGGGGGCTCCTGGTACGTCGAGTCGCTCACCGACTCCCTC GCCGAGGCGGCGTGGGCGGTCTTCACTGAGATCGAGCGTGCCGGAGGGATCTCGGCCACGCTGGCGGACGGCTCGCTGCG GGCCCGCCTCGCCGCGACCTGGGCGGCCCGTGCGGACGCGATCGCGCACCGGCGTGATCCGCTGACCGGCGTCAGCGAGT TCCCCAACCTGGGTGAGAAGCTCCCCGAGCGGCCGCCCGCCCCGGCGGAGACCGGCCCGTCCGGCGCCACGGCCGCGACC GGCACGACCGAGGCCGGCACGACGGCGACCGGAACGACCGGGGCCGGTGGCGGCCACGGGCTGCCGACCGTCACCTACGA CCAGGATTACGAGGCGCTGCGCGCCCGGTCGGACGCGCACACCGCCGCCACCGGCGCCCGGCCCGCGGTCTTCCTGGCCA CGATCGGCGGGGCCTCGGCGTTCACCGCCCGCGCGACCTTCGCCGCGAACCTGTTCCAGGCCGGCGGCCTGGCCACGCCC GACTCGGGCCCGGGCACGGATCCGGCCTCGATCGCGGCCGCGTTCACCGCGTCCGGCGCGAAGGTCGCCTGCCTGTGCTC GGGGGACAAGGTGTACGCCGAGTGGGTGGCCCCGGTGGCCGAGGCGCTGCACGCGGCGGGGGCCACGCGGGTCTGGCTGG CCGGCAAGGCCGGCTCGCGCGCGGAGACCGACGCCGCGGCGGGCGTGAGCGGGTACGTCTTCACCGGCTGCAACGCCGTC GAGGTGCTGCGGACGACCCTCGCAGAGGCGGGAGTGGCCTGA
Upstream 100 bases:
>100_bases GTCACCGGATGGCTGGCAGCAGGCCCGTGACCGGCCCGGGAAGCTGTGACGGGAGGAACAATCCGGGCTCGTGGGGCCGC GGGCCCCTACGATCCGTCCC
Downstream 100 bases:
>100_bases TGTCATCGATCCCCGACTTCGCCGAGATCGCGCTCGGAGCACCCAGCGGCGCGGACGCCGACGAGGCCCAGTGGCGGGTC GCGCTCGAGCAGGCCACCGG
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 653; Mature: 652
Protein sequence:
>653_residues MTVPPVELALAADFPDSTRDDWRRLVLGVLRKSGVAGEDTAPGEAEELIATSTYEGIRIRPLYDAADAAGAAGAGLPGLA PFVRGGRPQGANTDGWDVRALHAHPGPKAGGQAVLADLENGVTSLWLRLGPAGLPLDGLAEILRDVYLDLAPVVLDAGTL TGEAVAAFLALADERGVPASQLTGVLGADPLGLAARTGAAPDFSVARALAPRVAAEYPRLRTLVVDARPYHDAGGSDAEE LGASLATGVAYLRELTDAGLGVAEALGQLEFRYAVSADQFLSIAKLRAARRLWARVAEVCGAAPAERVQRQHAVTSSAMM SRRDPWVNMLRTTVACFAAGVGGADAVTVLPFDVRLGLADDFARRIARNTQTLLQEESSLIRVIDPAGGSWYVESLTDSL AEAAWAVFTEIERAGGISATLADGSLRARLAATWAARADAIAHRRDPLTGVSEFPNLGEKLPERPPAPAETGPSGATAAT GTTEAGTTATGTTGAGGGHGLPTVTYDQDYEALRARSDAHTAATGARPAVFLATIGGASAFTARATFAANLFQAGGLATP DSGPGTDPASIAAAFTASGAKVACLCSGDKVYAEWVAPVAEALHAAGATRVWLAGKAGSRAETDAAAGVSGYVFTGCNAV EVLRTTLAEAGVA
Sequences:
>Translated_653_residues MTVPPVELALAADFPDSTRDDWRRLVLGVLRKSGVAGEDTAPGEAEELIATSTYEGIRIRPLYDAADAAGAAGAGLPGLA PFVRGGRPQGANTDGWDVRALHAHPGPKAGGQAVLADLENGVTSLWLRLGPAGLPLDGLAEILRDVYLDLAPVVLDAGTL TGEAVAAFLALADERGVPASQLTGVLGADPLGLAARTGAAPDFSVARALAPRVAAEYPRLRTLVVDARPYHDAGGSDAEE LGASLATGVAYLRELTDAGLGVAEALGQLEFRYAVSADQFLSIAKLRAARRLWARVAEVCGAAPAERVQRQHAVTSSAMM SRRDPWVNMLRTTVACFAAGVGGADAVTVLPFDVRLGLADDFARRIARNTQTLLQEESSLIRVIDPAGGSWYVESLTDSL AEAAWAVFTEIERAGGISATLADGSLRARLAATWAARADAIAHRRDPLTGVSEFPNLGEKLPERPPAPAETGPSGATAAT GTTEAGTTATGTTGAGGGHGLPTVTYDQDYEALRARSDAHTAATGARPAVFLATIGGASAFTARATFAANLFQAGGLATP DSGPGTDPASIAAAFTASGAKVACLCSGDKVYAEWVAPVAEALHAAGATRVWLAGKAGSRAETDAAAGVSGYVFTGCNAV EVLRTTLAEAGVA >Mature_652_residues TVPPVELALAADFPDSTRDDWRRLVLGVLRKSGVAGEDTAPGEAEELIATSTYEGIRIRPLYDAADAAGAAGAGLPGLAP FVRGGRPQGANTDGWDVRALHAHPGPKAGGQAVLADLENGVTSLWLRLGPAGLPLDGLAEILRDVYLDLAPVVLDAGTLT GEAVAAFLALADERGVPASQLTGVLGADPLGLAARTGAAPDFSVARALAPRVAAEYPRLRTLVVDARPYHDAGGSDAEEL GASLATGVAYLRELTDAGLGVAEALGQLEFRYAVSADQFLSIAKLRAARRLWARVAEVCGAAPAERVQRQHAVTSSAMMS RRDPWVNMLRTTVACFAAGVGGADAVTVLPFDVRLGLADDFARRIARNTQTLLQEESSLIRVIDPAGGSWYVESLTDSLA EAAWAVFTEIERAGGISATLADGSLRARLAATWAARADAIAHRRDPLTGVSEFPNLGEKLPERPPAPAETGPSGATAATG TTEAGTTATGTTGAGGGHGLPTVTYDQDYEALRARSDAHTAATGARPAVFLATIGGASAFTARATFAANLFQAGGLATPD SGPGTDPASIAAAFTASGAKVACLCSGDKVYAEWVAPVAEALHAAGATRVWLAGKAGSRAETDAAAGVSGYVFTGCNAVE VLRTTLAEAGVA
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates. This conversion most likely represents an important source of building blocks for polyketide antibiotic biosynthes
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=441, Percent_Identity=30.3854875283447, Blast_Score=173, Evalue=5e-43, Organism=Escherichia coli, GI1789284, Length=436, Percent_Identity=31.8807339449541, Blast_Score=193, Evalue=3e-50, Organism=Caenorhabditis elegans, GI25144500, Length=436, Percent_Identity=30.045871559633, Blast_Score=174, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 66695; Mature: 66564
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00544 METMALONYL_COA_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPPVELALAADFPDSTRDDWRRLVLGVLRKSGVAGEDTAPGEAEELIATSTYEGIRIR CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEE PLYDAADAAGAAGAGLPGLAPFVRGGRPQGANTDGWDVRALHAHPGPKAGGQAVLADLEN ECCCCHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHC GVTSLWLRLGPAGLPLDGLAEILRDVYLDLAPVVLDAGTLTGEAVAAFLALADERGVPAS CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHH QLTGVLGADPLGLAARTGAAPDFSVARALAPRVAAEYPRLRTLVVDARPYHDAGGSDAEE HHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHH LGASLATGVAYLRELTDAGLGVAEALGQLEFRYAVSADQFLSIAKLRAARRLWARVAEVC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH GAAPAERVQRQHAVTSSAMMSRRDPWVNMLRTTVACFAAGVGGADAVTVLPFDVRLGLAD CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHH DFARRIARNTQTLLQEESSLIRVIDPAGGSWYVESLTDSLAEAAWAVFTEIERAGGISAT HHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEE LADGSLRARLAATWAARADAIAHRRDPLTGVSEFPNLGEKLPERPPAPAETGPSGATAAT ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC GTTEAGTTATGTTGAGGGHGLPTVTYDQDYEALRARSDAHTAATGARPAVFLATIGGASA CCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCHHHHCCCCCEEEEEECCCCHH FTARATFAANLFQAGGLATPDSGPGTDPASIAAAFTASGAKVACLCSGDKVYAEWVAPVA HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH EALHAAGATRVWLAGKAGSRAETDAAAGVSGYVFTGCNAVEVLRTTLAEAGVA HHHHHCCCCEEEEECCCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure TVPPVELALAADFPDSTRDDWRRLVLGVLRKSGVAGEDTAPGEAEELIATSTYEGIRIR CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEE PLYDAADAAGAAGAGLPGLAPFVRGGRPQGANTDGWDVRALHAHPGPKAGGQAVLADLEN ECCCCHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHC GVTSLWLRLGPAGLPLDGLAEILRDVYLDLAPVVLDAGTLTGEAVAAFLALADERGVPAS CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHH QLTGVLGADPLGLAARTGAAPDFSVARALAPRVAAEYPRLRTLVVDARPYHDAGGSDAEE HHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHH LGASLATGVAYLRELTDAGLGVAEALGQLEFRYAVSADQFLSIAKLRAARRLWARVAEVC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH GAAPAERVQRQHAVTSSAMMSRRDPWVNMLRTTVACFAAGVGGADAVTVLPFDVRLGLAD CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHH DFARRIARNTQTLLQEESSLIRVIDPAGGSWYVESLTDSLAEAAWAVFTEIERAGGISAT HHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEE LADGSLRARLAATWAARADAIAHRRDPLTGVSEFPNLGEKLPERPPAPAETGPSGATAAT ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC GTTEAGTTATGTTGAGGGHGLPTVTYDQDYEALRARSDAHTAATGARPAVFLATIGGASA CCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCHHHHCCCCCEEEEEECCCCHH FTARATFAANLFQAGGLATPDSGPGTDPASIAAAFTASGAKVACLCSGDKVYAEWVAPVA HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH EALHAAGATRVWLAGKAGSRAETDAAAGVSGYVFTGCNAVEVLRTTLAEAGVA HHHHHCCCCEEEEECCCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8099072 [H]