| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313724
Identifier: 158313724
GI number: 158313724
Start: 2266022
End: 2266942
Strand: Direct
Name: 158313724
Synonym: Franean1_1888
Alternate gene names: NA
Gene position: 2266022-2266942 (Clockwise)
Preceding gene: 158313723
Following gene: 158313725
Centisome position: 25.23
GC content: 74.92
Gene sequence:
>921_bases GTGATTTCCCTCCCGGACCGGCCGGCGGTGCCTGACCCCACGCTTCCCGTGGCGGCGATCGACGCCGCCGTGCGCGTGCT GGACTTGAACGACGCGCGCAACGGGATCGAGCCCCGTGAGGGCCTGGCGTTGCGGATCCTGAAGCTGGTCGAGGAGTGCG GGGAGGCGAGCGCCGCCCTGATCGGCCTGCGCGGCCAGAACCCGCGCAAGCCGCGTTCCTCCGAGCAGGATCTGGTGGAC GAGCTTCTCGACGTCGCGCTCGCCGCCCTGGTCGCGGCGGCGTCGCTGACCGATTCCTGGGCCGGGAGGTTCTGCGATCA GGTGCTGGCCAAGACGTCGCGGCTGGTCGCGGCGGTACCAGGGGAGCCAGGGGCGGCGTCACCGGCACCGGGCGCGGTGC CACCGGTGCCACCGGCGGCGCCGGCCGTGGCGCCGGGTGTCGACCCCGGTGGTGATCCCGGCCGGCCGGCTGGCCGTGGA CGCGGCATCCCCACCGCGCCGTCCGTCATGGCGATGGTGCGGGAGTTCCACGGCGCGCTGGGTGACGACCTGCCGGGCTC GCCGCGTCTCCAGGATGCGGCGACCCGCCGGCTGCGGCGCGAGTTCCTGGCCGAGGAGGCCGCGGAGGCCGTCGCCGCCG ATGAGAACGACGACCTCGTCGGCCTCGCCCAGGAGCTGGCCGACGTCGTGTACGTCGCTTACGGCACGGCCGCCCGGTAC GGGATCCCGCTCGACGCGGTCCTCGCCGAGATCCACCGCGCGAACCTGACGAAGGAGGCGCATCCCGCCGGCGGCAAGGC GGTCAAGGGCCCGACGTTCCGACCGGCGGACGTCGCCGCTGTCATGGGCTTCACACCCGCGGCACCCGCGGAGGTCGGTG GGCCGGCCGGGCGAGCCGTCGACGAGCGCGTCGAGCCGTAG
Upstream 100 bases:
>100_bases CAGTTCAGCCAGTTCGCCCTGCGCATCGTGGGCGCGGCGTAGGCGCGGCCGGCTTCGGCCAGCGATCAGGTGGGCGGGTT CCAGCGGTAGCGTCGGCGCG
Downstream 100 bases:
>100_bases CCGGCGGGCCTTGACCCAATGCCGTGAAGCTTAATTCGATCTTGAATGGTTGATGTTCGCTGTTCGTGGTTGGCGGGTTG GTACGGCGTGGCGGCGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: MazG Nucleotide Pyrophosphohydrolase
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MISLPDRPAVPDPTLPVAAIDAAVRVLDLNDARNGIEPREGLALRILKLVEECGEASAALIGLRGQNPRKPRSSEQDLVD ELLDVALAALVAAASLTDSWAGRFCDQVLAKTSRLVAAVPGEPGAASPAPGAVPPVPPAAPAVAPGVDPGGDPGRPAGRG RGIPTAPSVMAMVREFHGALGDDLPGSPRLQDAATRRLRREFLAEEAAEAVAADENDDLVGLAQELADVVYVAYGTAARY GIPLDAVLAEIHRANLTKEAHPAGGKAVKGPTFRPADVAAVMGFTPAAPAEVGGPAGRAVDERVEP
Sequences:
>Translated_306_residues MISLPDRPAVPDPTLPVAAIDAAVRVLDLNDARNGIEPREGLALRILKLVEECGEASAALIGLRGQNPRKPRSSEQDLVD ELLDVALAALVAAASLTDSWAGRFCDQVLAKTSRLVAAVPGEPGAASPAPGAVPPVPPAAPAVAPGVDPGGDPGRPAGRG RGIPTAPSVMAMVREFHGALGDDLPGSPRLQDAATRRLRREFLAEEAAEAVAADENDDLVGLAQELADVVYVAYGTAARY GIPLDAVLAEIHRANLTKEAHPAGGKAVKGPTFRPADVAAVMGFTPAAPAEVGGPAGRAVDERVEP >Mature_306_residues MISLPDRPAVPDPTLPVAAIDAAVRVLDLNDARNGIEPREGLALRILKLVEECGEASAALIGLRGQNPRKPRSSEQDLVD ELLDVALAALVAAASLTDSWAGRFCDQVLAKTSRLVAAVPGEPGAASPAPGAVPPVPPAAPAVAPGVDPGGDPGRPAGRG RGIPTAPSVMAMVREFHGALGDDLPGSPRLQDAATRRLRREFLAEEAAEAVAADENDDLVGLAQELADVVYVAYGTAARY GIPLDAVLAEIHRANLTKEAHPAGGKAVKGPTFRPADVAAVMGFTPAAPAEVGGPAGRAVDERVEP
Specific function: Unknown
COG id: COG4696
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31311; Mature: 31311
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLPDRPAVPDPTLPVAAIDAAVRVLDLNDARNGIEPREGLALRILKLVEECGEASAAL CCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEE IGLRGQNPRKPRSSEQDLVDELLDVALAALVAAASLTDSWAGRFCDQVLAKTSRLVAAVP EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC GEPGAASPAPGAVPPVPPAAPAVAPGVDPGGDPGRPAGRGRGIPTAPSVMAMVREFHGAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GDDLPGSPRLQDAATRRLRREFLAEEAAEAVAADENDDLVGLAQELADVVYVAYGTAARY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC GIPLDAVLAEIHRANLTKEAHPAGGKAVKGPTFRPADVAAVMGFTPAAPAEVGGPAGRAV CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHCCCCCCCHH DERVEP HHCCCC >Mature Secondary Structure MISLPDRPAVPDPTLPVAAIDAAVRVLDLNDARNGIEPREGLALRILKLVEECGEASAAL CCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEE IGLRGQNPRKPRSSEQDLVDELLDVALAALVAAASLTDSWAGRFCDQVLAKTSRLVAAVP EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC GEPGAASPAPGAVPPVPPAAPAVAPGVDPGGDPGRPAGRGRGIPTAPSVMAMVREFHGAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GDDLPGSPRLQDAATRRLRREFLAEEAAEAVAADENDDLVGLAQELADVVYVAYGTAARY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC GIPLDAVLAEIHRANLTKEAHPAGGKAVKGPTFRPADVAAVMGFTPAAPAEVGGPAGRAV CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHCCCCCCCHH DERVEP HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA