| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313709
Identifier: 158313709
GI number: 158313709
Start: 2250791
End: 2251939
Strand: Direct
Name: 158313709
Synonym: Franean1_1873
Alternate gene names: NA
Gene position: 2250791-2251939 (Clockwise)
Preceding gene: 158313707
Following gene: 158313710
Centisome position: 25.06
GC content: 73.98
Gene sequence:
>1149_bases ATGCGGGTCCGTTCGCGGGCAGCGATGGTGGTCCCGCTTGTCATCATCGTGGCGGTCTGCATGGTCGACGCCGTCGGGGG ACCCGACTTCGTCATCATCGCGCTCGTGGTCATGGCTCCGCTGCTGGCTGCCAGCACGGTCGGTCCACGACTGACCGGTG TCTACGCACTCGCCGCGCTCGCCGGGGCGGGCGCGGTGGAGATCGCTAACCAGGTCGTGGGACCGGATGCGGGAGGGGGC CAGATCGCGCGGGTGATCCGGCTCGCCGGCATCGCCCTCGGCGGCGGGATAGCCGTGGTCGCGAGCCGGGCCCGCCAGGC TCGGGAGCGCCGGCTGACCGCGCTGGTGCGGGTGGCCGAGGTCGCGCAGCGTGCCATTTTGAGCCCGGTCCCGGCGGTCG TCGACGGCCTGCGGTTCACCGCCCTGTACCGGAGCGCGGCCACGGAGGCCAGCGTCGGCGGAGACCTCTACGAGGTGGTG GACACCCGGTGGGGCGTGCGGCTGCTGGTGGGGGACGCCCGGGGCAAGGGGCTGGAGGCGGTTCGGCTCGCCAGCCGTGT CCTGGGCTGCTTCCGGGCGCTGGCGGGGCGGCTCGAGGACCCGGCGGATCTGGTCGCGGCGCTCGACAACGAGGTCGCGG CCTTCGGGAGCGAGGAGAGCGAGGAGAGCGAGGATTTCGTCACCGCGGTCGTCGCCCAGATCGACCGCGCCGGGCGGATG TCGCTGCTCAACGCCGGCCACCCCGACCCGCTGCGGGTCCGGGGCGGCGTCGTGGAGCGACTCGGTGTCGCCGACCGGCA GCCACCGCTCGGTCTCGGTGCCGCGCCGGCCGCGGCCCACTACCTTGTCGCCCAGTCTGACCGGATGCTCTTCTACACCG ACGGCCTGGCCGAGGCCCGCAACCGCGGTACCCGGGAGTTCTTCCCGCTTCTCCCGGCCGTGTCGGACGCGTTCGCCGCC GCGGAGCTGCCCGAGGCGAACACGCACCTGGTCAGCGCGCTCGTCTGCTGGACCGGCGGCTCGCTTGGCGACGACGTCGC GCTCGTCGCTGTGGAACGCCCCAAGCCGGGGGCCGAGCAGGCCCTCCCCGCCTGCGGCGAGTCCGCCGCGGCCACATCGA CAGGGCCGGGGGATTTCAGGACCGGGTAG
Upstream 100 bases:
>100_bases CTCGTCCTGGAGCGCCGCGGCGTGGCCGTAGCCGTCCGTCCGGTGGCCGCCCGTTCGGGTCGGGGCACACCCGACGGGTA CCACGTTCGACGTGAGCGTC
Downstream 100 bases:
>100_bases TGGGCGTGGCCAGGATCGAGCGGACGGACGTCGCTGGGCGCTTGAGCAGGTTCTCAAGCTCTGGTCCGGTGGTGGCGAAC TCTCCTGGGGGTACAGATTC
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Protein Serine/Threonine Phosphatase; Magnesium Or Manganese-Dependent Protein Phosphatase; Serine Phosphatase; Stage II Sporulation E Family Protein; Phosphatase; LOW QUALITY PROTEIN Membrane Protein; Integral Membrane Serine Phosphatase; C-Like; Membrane Phosphatase; Serine/Threonine Phosphatase; PAS/PAC Sensor Protein
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRVRSRAAMVVPLVIIVAVCMVDAVGGPDFVIIALVVMAPLLAASTVGPRLTGVYALAALAGAGAVEIANQVVGPDAGGG QIARVIRLAGIALGGGIAVVASRARQARERRLTALVRVAEVAQRAILSPVPAVVDGLRFTALYRSAATEASVGGDLYEVV DTRWGVRLLVGDARGKGLEAVRLASRVLGCFRALAGRLEDPADLVAALDNEVAAFGSEESEESEDFVTAVVAQIDRAGRM SLLNAGHPDPLRVRGGVVERLGVADRQPPLGLGAAPAAAHYLVAQSDRMLFYTDGLAEARNRGTREFFPLLPAVSDAFAA AELPEANTHLVSALVCWTGGSLGDDVALVAVERPKPGAEQALPACGESAAATSTGPGDFRTG
Sequences:
>Translated_382_residues MRVRSRAAMVVPLVIIVAVCMVDAVGGPDFVIIALVVMAPLLAASTVGPRLTGVYALAALAGAGAVEIANQVVGPDAGGG QIARVIRLAGIALGGGIAVVASRARQARERRLTALVRVAEVAQRAILSPVPAVVDGLRFTALYRSAATEASVGGDLYEVV DTRWGVRLLVGDARGKGLEAVRLASRVLGCFRALAGRLEDPADLVAALDNEVAAFGSEESEESEDFVTAVVAQIDRAGRM SLLNAGHPDPLRVRGGVVERLGVADRQPPLGLGAAPAAAHYLVAQSDRMLFYTDGLAEARNRGTREFFPLLPAVSDAFAA AELPEANTHLVSALVCWTGGSLGDDVALVAVERPKPGAEQALPACGESAAATSTGPGDFRTG >Mature_382_residues MRVRSRAAMVVPLVIIVAVCMVDAVGGPDFVIIALVVMAPLLAASTVGPRLTGVYALAALAGAGAVEIANQVVGPDAGGG QIARVIRLAGIALGGGIAVVASRARQARERRLTALVRVAEVAQRAILSPVPAVVDGLRFTALYRSAATEASVGGDLYEVV DTRWGVRLLVGDARGKGLEAVRLASRVLGCFRALAGRLEDPADLVAALDNEVAAFGSEESEESEDFVTAVVAQIDRAGRM SLLNAGHPDPLRVRGGVVERLGVADRQPPLGLGAAPAAAHYLVAQSDRMLFYTDGLAEARNRGTREFFPLLPAVSDAFAA AELPEANTHLVSALVCWTGGSLGDDVALVAVERPKPGAEQALPACGESAAATSTGPGDFRTG
Specific function: Unknown
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39261; Mature: 39261
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRSRAAMVVPLVIIVAVCMVDAVGGPDFVIIALVVMAPLLAASTVGPRLTGVYALAAL CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AGAGAVEIANQVVGPDAGGGQIARVIRLAGIALGGGIAVVASRARQARERRLTALVRVAE HCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VAQRAILSPVPAVVDGLRFTALYRSAATEASVGGDLYEVVDTRWGVRLLVGDARGKGLEA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCHHH VRLASRVLGCFRALAGRLEDPADLVAALDNEVAAFGSEESEESEDFVTAVVAQIDRAGRM HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCH SLLNAGHPDPLRVRGGVVERLGVADRQPPLGLGAAPAAAHYLVAQSDRMLFYTDGLAEAR HHHCCCCCCCEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHEECCCCEEEEECCHHHHH NRGTREFFPLLPAVSDAFAAAELPEANTHLVSALVCWTGGSLGDDVALVAVERPKPGAEQ CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH ALPACGESAAATSTGPGDFRTG HCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRVRSRAAMVVPLVIIVAVCMVDAVGGPDFVIIALVVMAPLLAASTVGPRLTGVYALAAL CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AGAGAVEIANQVVGPDAGGGQIARVIRLAGIALGGGIAVVASRARQARERRLTALVRVAE HCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VAQRAILSPVPAVVDGLRFTALYRSAATEASVGGDLYEVVDTRWGVRLLVGDARGKGLEA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCHHH VRLASRVLGCFRALAGRLEDPADLVAALDNEVAAFGSEESEESEDFVTAVVAQIDRAGRM HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCH SLLNAGHPDPLRVRGGVVERLGVADRQPPLGLGAAPAAAHYLVAQSDRMLFYTDGLAEAR HHHCCCCCCCEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHEECCCCEEEEECCHHHHH NRGTREFFPLLPAVSDAFAAAELPEANTHLVSALVCWTGGSLGDDVALVAVERPKPGAEQ CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH ALPACGESAAATSTGPGDFRTG HCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA