| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313658
Identifier: 158313658
GI number: 158313658
Start: 2187354
End: 2187800
Strand: Direct
Name: 158313658
Synonym: Franean1_1822
Alternate gene names: NA
Gene position: 2187354-2187800 (Clockwise)
Preceding gene: 158313657
Following gene: 158313659
Centisome position: 24.35
GC content: 66.44
Gene sequence:
>447_bases ATGGCGGACCACGCGCAGTCGTCGATCGTCATCGATGCCAGGCCGGCCGTCATCATGGGGGCCATCGCGGACATCGCCGC CTACCCGACCTGGGTCGGCCAGATCGAACAGGCCGAGATCCTCGAGGTCGGCCCGGACGGCCGCCCGCGGCAGGCCCGGT TCCGGATCAACGCCGTCGTCGTGAAGGACGAGTTCGTCAACGAGTACACCTGGAAGGGCGACGAGCACGTCAGCTGGAGC CTCGTCTCCGGCGAGGCGATGTCGACCCAGGACGGTTCGTACACGTTGCGTGATCTCGGCGACGGCAGCACCGAGGTGAC CTACGACCTCACCGTCGAGCTCAAGATCAAGATCCCCGGCCTGCTCCGTCGGAAGGTGCAGGGCGGCATCGTCGACGCGG CGCTCAAGGACCTCAAGAAGCACGTCGAGAAGCTCACCGAGAGCTGA
Upstream 100 bases:
>100_bases CGAACGGCCCGCGGAGACGGGCCGGCGGCACGGCCCGGACAGGACCGGCGGGTCCGACCAGGCCCCGCCGGGGCGATGAG ATGTGGAGGTGCTGGCGGCT
Downstream 100 bases:
>100_bases CCATCCGGTGCGGTGTGTGCTCCTGACGGGCAAGGGTGGTGGTGGGACCACGACGGTGGCAGCGGCGACGGCCACGCTCG CGGCCCAGCGCGGCCACCGG
Product: cyclase/dehydrase
Products: NA
Alternate protein names: Polyketide Cyclase/Dehydrase; Cyclase; Cyclase/Dehydrase Family Protein; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MADHAQSSIVIDARPAVIMGAIADIAAYPTWVGQIEQAEILEVGPDGRPRQARFRINAVVVKDEFVNEYTWKGDEHVSWS LVSGEAMSTQDGSYTLRDLGDGSTEVTYDLTVELKIKIPGLLRRKVQGGIVDAALKDLKKHVEKLTES
Sequences:
>Translated_148_residues MADHAQSSIVIDARPAVIMGAIADIAAYPTWVGQIEQAEILEVGPDGRPRQARFRINAVVVKDEFVNEYTWKGDEHVSWS LVSGEAMSTQDGSYTLRDLGDGSTEVTYDLTVELKIKIPGLLRRKVQGGIVDAALKDLKKHVEKLTES >Mature_147_residues ADHAQSSIVIDARPAVIMGAIADIAAYPTWVGQIEQAEILEVGPDGRPRQARFRINAVVVKDEFVNEYTWKGDEHVSWSL VSGEAMSTQDGSYTLRDLGDGSTEVTYDLTVELKIKIPGLLRRKVQGGIVDAALKDLKKHVEKLTES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16265; Mature: 16133
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHAQSSIVIDARPAVIMGAIADIAAYPTWVGQIEQAEILEVGPDGRPRQARFRINAVV CCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCEEEEEEEEEE VKDEFVNEYTWKGDEHVSWSLVSGEAMSTQDGSYTLRDLGDGSTEVTYDLTVELKIKIPG EECCCCCCCCCCCCCCEEEEEECCCEECCCCCCEEEEECCCCCCEEEEEEEEEEEEECCH LLRRKVQGGIVDAALKDLKKHVEKLTES HHHHHHCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADHAQSSIVIDARPAVIMGAIADIAAYPTWVGQIEQAEILEVGPDGRPRQARFRINAVV CCCCCCEEEEECCCHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCEEEEEEEEEE VKDEFVNEYTWKGDEHVSWSLVSGEAMSTQDGSYTLRDLGDGSTEVTYDLTVELKIKIPG EECCCCCCCCCCCCCCEEEEEECCCEECCCCCCEEEEECCCCCCEEEEEEEEEEEEECCH LLRRKVQGGIVDAALKDLKKHVEKLTES HHHHHHCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA