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The map label for this gene is yadR [C]

Identifier: 158313633

GI number: 158313633

Start: 2160303

End: 2160665

Strand: Direct

Name: yadR [C]

Synonym: Franean1_1797

Alternate gene names: 158313633

Gene position: 2160303-2160665 (Clockwise)

Preceding gene: 158313629

Following gene: 158313634

Centisome position: 24.05

GC content: 65.84

Gene sequence:

>363_bases
ATGACCGTGCAGGACACAACCGAGACCGAGACCAGGCCGAGCAGCGTCGTTCTCACCGACACGGCCGCCGGCAAGGTGAA
GACCCTGCTCGAGCAGGAGGGGAGGGATGACCTCCAGCTCCGGATCGCCGTGCAGCCCGGCGGCTGCTCTGGCATGCGCT
ACCAGCTCTTCTTCGACGAGCGCCAACTCGACGGCGACACGGTGCTCGACTTCTCGGGGGTCAAGGTGGCCGTTGACCGG
ATGAGCTACCCCTACCTCGGCGGCGCGACGATCGACTTCGTCGACACGATCGAGAAGCAGGGCTTCACGATCGACAACCC
GAACGCGCAGGGCTCCTGCGCGTGTGGCGACTCCTTCCACTGA

Upstream 100 bases:

>100_bases
TGGGGAGCCGTCGCCCGTTGGCGTCTCCTCGCGTAAGCCGCCTTGGGTACCAGCAAGCCTGGTGAACCAGGCACGTCCAC
AAGGGCAGGGAGCAGCCCCT

Downstream 100 bases:

>100_bases
TCGGGCGCGGGCGGGCGCGGGCCGTCCCGGTGGGCCGCGTCTCGTCTCCGGTCAGCGGGGGAGGCGTCTGATCCCTCGAC
AACGGAACCCGGTGTGGTGC

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTVQDTTETETRPSSVVLTDTAAGKVKTLLEQEGRDDLQLRIAVQPGGCSGMRYQLFFDERQLDGDTVLDFSGVKVAVDR
MSYPYLGGATIDFVDTIEKQGFTIDNPNAQGSCACGDSFH

Sequences:

>Translated_120_residues
MTVQDTTETETRPSSVVLTDTAAGKVKTLLEQEGRDDLQLRIAVQPGGCSGMRYQLFFDERQLDGDTVLDFSGVKVAVDR
MSYPYLGGATIDFVDTIEKQGFTIDNPNAQGSCACGDSFH
>Mature_119_residues
TVQDTTETETRPSSVVLTDTAAGKVKTLLEQEGRDDLQLRIAVQPGGCSGMRYQLFFDERQLDGDTVLDFSGVKVAVDRM
SYPYLGGATIDFVDTIEKQGFTIDNPNAQGSCACGDSFH

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=121, Percent_Identity=28.9256198347107, Blast_Score=67, Evalue=2e-12,
Organism=Homo sapiens, GI160420328, Length=118, Percent_Identity=34.7457627118644, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1786351, Length=102, Percent_Identity=42.156862745098, Blast_Score=94, Evalue=3e-21,
Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=42.4528301886792, Blast_Score=86, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71998452, Length=107, Percent_Identity=36.4485981308411, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=31.1320754716981, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=31.1320754716981, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323001, Length=104, Percent_Identity=29.8076923076923, Blast_Score=62, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24642263, Length=109, Percent_Identity=36.697247706422, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13061; Mature: 12929

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQDTTETETRPSSVVLTDTAAGKVKTLLEQEGRDDLQLRIAVQPGGCSGMRYQLFFDE
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECC
RQLDGDTVLDFSGVKVAVDRMSYPYLGGATIDFVDTIEKQGFTIDNPNAQGSCACGDSFH
CCCCCCEEEECCCCEEEEECCCCCCCCCCEEHHHHHHHHCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVQDTTETETRPSSVVLTDTAAGKVKTLLEQEGRDDLQLRIAVQPGGCSGMRYQLFFDE
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECC
RQLDGDTVLDFSGVKVAVDRMSYPYLGGATIDFVDTIEKQGFTIDNPNAQGSCACGDSFH
CCCCCCEEEECCCCEEEEECCCCCCCCCCEEHHHHHHHHCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 11681203 [H]