| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313584
Identifier: 158313584
GI number: 158313584
Start: 2097732
End: 2098220
Strand: Direct
Name: 158313584
Synonym: Franean1_1748
Alternate gene names: NA
Gene position: 2097732-2098220 (Clockwise)
Preceding gene: 158313582
Following gene: 158313585
Centisome position: 23.35
GC content: 74.44
Gene sequence:
>489_bases ATGACGGAGGAATTCGGCGTTCCGAACGGCAACGGCAACGGCGGCGCTGACGGCAATGGCAACGGCGTCGGCGTCGGCGG CGGCGGTGAGCGGCGGCAGGCCGAGTCGGTCCGCTCGCCGGCCGGTGAGGTCTACGACTGGTACACCCGCGGGATGGCGC TGCTCGGGCACGGTGACGCGAACGCGGCGGTGCAGCTCCTCGCGCATGCCGTCGCGGCGGAGCCGGCGTCCCCGAGTGTG CGGGAGGCGCTGGGCCGGGCGCAGTTCGAGGCCGGGCAGTACGACGACGCCCTGCGGACCTTCGCCTGGATCGTCGACCG CCATCCGACCGACGACTACGCCCAGTTCGGCCTCGGGATGGCCGCGCGCCGCACCGGCGACCTGCGCTCCGCCGTCGAGC ATCTTGCGCTCGCGGTGGCGATGCGGCCCGATCTGGCGCACTACGGGGTCGCCCTGCGCGGGGCACGGGCCGCTCTGAAC CGCGCGTGA
Upstream 100 bases:
>100_bases CCGGTGGCTGCCCGGCGCGGCCCGGTGCGGCGTCCCGGCGGTGCTGATGCCGCCGCCGCGGTGGCCACGGCCGTGGCGGT CCGGACGACGTGGAGGTGCC
Downstream 100 bases:
>100_bases CGGTCCCCCGAGAGGCGGCGGGCACGGCGTGGTCCGTGCTCGCCGGAACGAGCCGGCCACTGGTGGCGATGTTCGACGTC GCGTTGATGGATCTCGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Domain-Containing Protein
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTEEFGVPNGNGNGGADGNGNGVGVGGGGERRQAESVRSPAGEVYDWYTRGMALLGHGDANAAVQLLAHAVAAEPASPSV REALGRAQFEAGQYDDALRTFAWIVDRHPTDDYAQFGLGMAARRTGDLRSAVEHLALAVAMRPDLAHYGVALRGARAALN RA
Sequences:
>Translated_162_residues MTEEFGVPNGNGNGGADGNGNGVGVGGGGERRQAESVRSPAGEVYDWYTRGMALLGHGDANAAVQLLAHAVAAEPASPSV REALGRAQFEAGQYDDALRTFAWIVDRHPTDDYAQFGLGMAARRTGDLRSAVEHLALAVAMRPDLAHYGVALRGARAALN RA >Mature_161_residues TEEFGVPNGNGNGGADGNGNGVGVGGGGERRQAESVRSPAGEVYDWYTRGMALLGHGDANAAVQLLAHAVAAEPASPSVR EALGRAQFEAGQYDDALRTFAWIVDRHPTDDYAQFGLGMAARRTGDLRSAVEHLALAVAMRPDLAHYGVALRGARAALNR A
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16900; Mature: 16769
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEFGVPNGNGNGGADGNGNGVGVGGGGERRQAESVRSPAGEVYDWYTRGMALLGHGDA CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHCCEEEEECCCH NAAVQLLAHAVAAEPASPSVREALGRAQFEAGQYDDALRTFAWIVDRHPTDDYAQFGLGM HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCH AARRTGDLRSAVEHLALAVAMRPDLAHYGVALRGARAALNRA HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEEFGVPNGNGNGGADGNGNGVGVGGGGERRQAESVRSPAGEVYDWYTRGMALLGHGDA CCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHCCEEEEECCCH NAAVQLLAHAVAAEPASPSVREALGRAQFEAGQYDDALRTFAWIVDRHPTDDYAQFGLGM HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCH AARRTGDLRSAVEHLALAVAMRPDLAHYGVALRGARAALNRA HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA