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The map label for this gene is nusB [H]

Identifier: 158313539

GI number: 158313539

Start: 2035274

End: 2035681

Strand: Direct

Name: nusB [H]

Synonym: Franean1_1703

Alternate gene names: 158313539

Gene position: 2035274-2035681 (Clockwise)

Preceding gene: 158313538

Following gene: 158313541

Centisome position: 22.66

GC content: 72.06

Gene sequence:

>408_bases
ATGCGCTCGGCGCGGGCGATGGAGACCCTTGCCGCGCACCGGGCGCAGGCCGACCCGCCGGTGCCGGACTACACCTCGGA
CCTCGTCGAGGGCGTGGTGGCCCACCTGGCCGAGATAGACGCGCACATCGCCCGGTTCGCCCAGGGCTGGACACTGGACC
GGATGCCCCCGGTGGACCGGAACATCCTCCGGATCGCGGTGCTGGAGCTGTTCTGGCGTTCCGACGTGCCGGACCGGGTC
GTGATCGACGAGGCGGTGCGGCTGGCCAAGACGATCTCCACTGAGCGGTCGCCGGCATTCGTCAACGGCCTGCTGGCGAG
CCTGCTCAAGGAGAAACCGGTGCCGGAGGGAAGCCCTCGGGCAGCCGGGGCGGCTGAGGCCGTGGGCGGCGAGTCGGCCG
AGGCCTGA

Upstream 100 bases:

>100_bases
AGGTCGACACCCGCGACGGCCGGTACCTGGGCCGGGTGACGAGCTGAGCGCCAGGTCCAAGGCCCGCAAGCGGGCGCTGG
ACGTCCTCTACGAGGCGGAC

Downstream 100 bases:

>100_bases
GCTCGCGTACCGAGGCTCGCGCCTGAGTCTGCGCGGTGTCCCGGTACGTCACGGATGTGACGTACCGGGTCGTCCCCCAG
AAGATTCCTGGTGCTGGTGC

Product: NusB antitermination factor

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRSARAMETLAAHRAQADPPVPDYTSDLVEGVVAHLAEIDAHIARFAQGWTLDRMPPVDRNILRIAVLELFWRSDVPDRV
VIDEAVRLAKTISTERSPAFVNGLLASLLKEKPVPEGSPRAAGAAEAVGGESAEA

Sequences:

>Translated_135_residues
MRSARAMETLAAHRAQADPPVPDYTSDLVEGVVAHLAEIDAHIARFAQGWTLDRMPPVDRNILRIAVLELFWRSDVPDRV
VIDEAVRLAKTISTERSPAFVNGLLASLLKEKPVPEGSPRAAGAAEAVGGESAEA
>Mature_135_residues
MRSARAMETLAAHRAQADPPVPDYTSDLVEGVVAHLAEIDAHIARFAQGWTLDRMPPVDRNILRIAVLELFWRSDVPDRV
VIDEAVRLAKTISTERSPAFVNGLLASLLKEKPVPEGSPRAAGAAEAVGGESAEA

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 14533; Mature: 14533

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSARAMETLAAHRAQADPPVPDYTSDLVEGVVAHLAEIDAHIARFAQGWTLDRMPPVDR
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
NILRIAVLELFWRSDVPDRVVIDEAVRLAKTISTERSPAFVNGLLASLLKEKPVPEGSPR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
AAGAAEAVGGESAEA
CCCHHHHCCCCCCCC
>Mature Secondary Structure
MRSARAMETLAAHRAQADPPVPDYTSDLVEGVVAHLAEIDAHIARFAQGWTLDRMPPVDR
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
NILRIAVLELFWRSDVPDRVVIDEAVRLAKTISTERSPAFVNGLLASLLKEKPVPEGSPR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
AAGAAEAVGGESAEA
CCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA