| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is aroB [H]
Identifier: 158313537
GI number: 158313537
Start: 2033332
End: 2034447
Strand: Direct
Name: aroB [H]
Synonym: Franean1_1701
Alternate gene names: 158313537
Gene position: 2033332-2034447 (Clockwise)
Preceding gene: 158313536
Following gene: 158313538
Centisome position: 22.64
GC content: 73.92
Gene sequence:
>1116_bases ATGTGCGCGATGAAGGTTTCCGACATGGTCCGCATCCAGGTCACCCCGTCCGGTGACCGGGCCTACGACGTGGTGCTGGG CGAGGGCGCCCTCTGCGAGCTACCGGCGCTGGCCGCGGGGCGCACCCGGGTCATGGTCATTCACCCGCGAGCGCTGCGGG CCACCGCCGCGGCGGTCATCGCCGAGCTGCGGGCCGGCGCCGGTGCCGGCGTCGAGACGCACGCGTTCGAGGTGCCGGAC GGCGAGGAGGCCAAGCAGCTGCGGGTCGCGGGCGCCTGCTGGGACGCCCTCGGCCGTGTCGGCTTCACCCGCGACGACCT GGTGGTCGGGCTCGGCGGCGGGACGACGACCGACCTGGCCGGGTTCGCCGCGGCGGGCTGGCTGCGTGGTGTCGACGTCA TCCAGGTGCCCACCACCGTGCTCGGGATGGTCGATGCGGCGGTCGGTGGCAAGACGGGCATCGACATCGAGGCGGGCAAG AACCTCGTCGGCGCCTTCCACCAGCCGCTGGCGGTGCTCTGTGACCTGTCGACCCTGGCCAGCCTGCCGGCGGTCGAGGT CCGGGCCGGGCTCGCCGAGGTCGTCAAGGCCGGGTTCATCGCCGATCCGCGCATCCTCGAGCTGCTGGAGGCCGATCCGA CCGGGTCGGCGCGGCTGCCCGAGCTCGTCGAGCGGTCGATCCGGGTCAAGGCGGCGGTGGTGTCCGGCGACCCGCGCGAG GCCGGCCGGCGCGAGATCCTGAACTACGGGCACACCCTCGCCCACGCGATCGAGAAGGTCGAGAACTTCTCCTGGCGGCA CGGCGCGGCGGTCTCGGTCGGCATGGTCTTCGCCGCCGAGCTCTCCCGGCTCGTCGCCGGGCTCGACCGCGTGACCGCCG ATCGCCACCGCGAGCTGCTGCGGGCCATCGGGCTGCCGGTGGAGTACCGGGGGGACCGCTGGCCGGCGCTGCTCGACGCG ATGCGGGTGGACAAGAAGACCCGGGGCCGGCGGTTGCGTTTCGTTGTGCTCGAAGCGCTCGGCCGGCCGCGCGGATTCGA CGATCCCGAGCCCGGCCTGCTGCTGGCCGCGTACGGCTCGGTCGCCGCGGGCGGTGTGAGCGCTACCGGGAACTGA
Upstream 100 bases:
>100_bases ACGAGGAGGTGGCCGCGATCACCGTGGACACCGCCGCCCTCGGGATCGACGACGTCGTCGCCGCGATCCTGATCGAGCTC GCCGGGAGGGCGGGGCACTG
Downstream 100 bases:
>100_bases CCGTTCGGCTGGCACCGCGCGTGGTCCGCCGTGGGCTGCGAGGCGGCCATGCCCTCGATCTGTAGACTTTGCCGCGGCCT GACCCGGTGACGGGCGGCGG
Product: 3-dehydroquinate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MCAMKVSDMVRIQVTPSGDRAYDVVLGEGALCELPALAAGRTRVMVIHPRALRATAAAVIAELRAGAGAGVETHAFEVPD GEEAKQLRVAGACWDALGRVGFTRDDLVVGLGGGTTTDLAGFAAAGWLRGVDVIQVPTTVLGMVDAAVGGKTGIDIEAGK NLVGAFHQPLAVLCDLSTLASLPAVEVRAGLAEVVKAGFIADPRILELLEADPTGSARLPELVERSIRVKAAVVSGDPRE AGRREILNYGHTLAHAIEKVENFSWRHGAAVSVGMVFAAELSRLVAGLDRVTADRHRELLRAIGLPVEYRGDRWPALLDA MRVDKKTRGRRLRFVVLEALGRPRGFDDPEPGLLLAAYGSVAAGGVSATGN
Sequences:
>Translated_371_residues MCAMKVSDMVRIQVTPSGDRAYDVVLGEGALCELPALAAGRTRVMVIHPRALRATAAAVIAELRAGAGAGVETHAFEVPD GEEAKQLRVAGACWDALGRVGFTRDDLVVGLGGGTTTDLAGFAAAGWLRGVDVIQVPTTVLGMVDAAVGGKTGIDIEAGK NLVGAFHQPLAVLCDLSTLASLPAVEVRAGLAEVVKAGFIADPRILELLEADPTGSARLPELVERSIRVKAAVVSGDPRE AGRREILNYGHTLAHAIEKVENFSWRHGAAVSVGMVFAAELSRLVAGLDRVTADRHRELLRAIGLPVEYRGDRWPALLDA MRVDKKTRGRRLRFVVLEALGRPRGFDDPEPGLLLAAYGSVAAGGVSATGN >Mature_371_residues MCAMKVSDMVRIQVTPSGDRAYDVVLGEGALCELPALAAGRTRVMVIHPRALRATAAAVIAELRAGAGAGVETHAFEVPD GEEAKQLRVAGACWDALGRVGFTRDDLVVGLGGGTTTDLAGFAAAGWLRGVDVIQVPTTVLGMVDAAVGGKTGIDIEAGK NLVGAFHQPLAVLCDLSTLASLPAVEVRAGLAEVVKAGFIADPRILELLEADPTGSARLPELVERSIRVKAAVVSGDPRE AGRREILNYGHTLAHAIEKVENFSWRHGAAVSVGMVFAAELSRLVAGLDRVTADRHRELLRAIGLPVEYRGDRWPALLDA MRVDKKTRGRRLRFVVLEALGRPRGFDDPEPGLLLAAYGSVAAGGVSATGN
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; second step. [C]
COG id: COG0337
COG function: function code E; 3-dehydroquinate synthetase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dehydroquinate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1789791, Length=346, Percent_Identity=39.8843930635838, Blast_Score=181, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6320332, Length=331, Percent_Identity=35.0453172205438, Blast_Score=180, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016303 - InterPro: IPR002658 - InterPro: IPR016037 [H]
Pfam domain/function: PF01761 DHQ_synthase [H]
EC number: =4.2.3.4 [H]
Molecular weight: Translated: 38949; Mature: 38949
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAMKVSDMVRIQVTPSGDRAYDVVLGEGALCELPALAAGRTRVMVIHPRALRATAAAVI CCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH AELRAGAGAGVETHAFEVPDGEEAKQLRVAGACWDALGRVGFTRDDLVVGLGGGTTTDLA HHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHH GFAAAGWLRGVDVIQVPTTVLGMVDAAVGGKTGIDIEAGKNLVGAFHQPLAVLCDLSTLA HHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHCHHHHH SLPAVEVRAGLAEVVKAGFIADPRILELLEADPTGSARLPELVERSIRVKAAVVSGDPRE CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEECCCCHH AGRREILNYGHTLAHAIEKVENFSWRHGAAVSVGMVFAAELSRLVAGLDRVTADRHRELL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIGLPVEYRGDRWPALLDAMRVDKKTRGRRLRFVVLEALGRPRGFDDPEPGLLLAAYGS HHHCCCEEECCCCCHHHHHHHHHCHHHCCCEEHHHHHHHHCCCCCCCCCCCCEEEEECCC VAAGGVSATGN HHCCCCCCCCC >Mature Secondary Structure MCAMKVSDMVRIQVTPSGDRAYDVVLGEGALCELPALAAGRTRVMVIHPRALRATAAAVI CCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH AELRAGAGAGVETHAFEVPDGEEAKQLRVAGACWDALGRVGFTRDDLVVGLGGGTTTDLA HHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHH GFAAAGWLRGVDVIQVPTTVLGMVDAAVGGKTGIDIEAGKNLVGAFHQPLAVLCDLSTLA HHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHCHHHHH SLPAVEVRAGLAEVVKAGFIADPRILELLEADPTGSARLPELVERSIRVKAAVVSGDPRE CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEECCCCHH AGRREILNYGHTLAHAIEKVENFSWRHGAAVSVGMVFAAELSRLVAGLDRVTADRHRELL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIGLPVEYRGDRWPALLDAMRVDKKTRGRRLRFVVLEALGRPRGFDDPEPGLLLAAYGS HHHCCCEEECCCCCHHHHHHHHHCHHHCCCEEHHHHHHHHCCCCCCCCCCCCEEEEECCC VAAGGVSATGN HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]