| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313505
Identifier: 158313505
GI number: 158313505
Start: 1995947
End: 1996477
Strand: Direct
Name: 158313505
Synonym: Franean1_1669
Alternate gene names: NA
Gene position: 1995947-1996477 (Clockwise)
Preceding gene: 158313504
Following gene: 158313508
Centisome position: 22.22
GC content: 71.56
Gene sequence:
>531_bases ATGGCGGTACACCAGGCTCTTCTCCGGCGGCAGTGGAGCGAAGACGTCGTCCTGTTCCCCCACACCGGTCCCGACCCCAC GGCCGAGGAGGCCGAGCAGCTCGCCGCCCGCAGCATCCGAGTCGTGCCCGGTGCCGTCGAGGCCCTCGAGACCGCGAACG ACCGCCTCGAATCCGTCCGACTGCACCACGGGGAGGTGTTTCCCCGCCGGGCCCTGGCGGTCGCGCCGCGCTTCACCACC CGCACCGCGATACTCGGTGCGCTCGGCCTGGAATCAACCGACCTGGCCCTGAACGGCCACGTGATCGGCCGACAGGTGCA GTCGGACCCCACCGGCGCGACCCAGGCCGCCGGGGTGTGGATCGCGGGAAACGTGGCAGACGTGGTGGCCTCAGTGATCA CGGCGTCCGCCGCCGGCGTGAAGGCTGCCGCCGCCCTCAACGCGGACCTGATCGCCGAAAAGATTCGCCTCGCTGTGGCG GCACGGCGGACGGGCTGCGTTCCGAGCGGCTGGCCTGCCTTCAACGGCTGA
Upstream 100 bases:
>100_bases GCAACCGGACGGGCCGAGGTCATCGGCTACGGCGGTGAGATCGTCACTGCCACGGATGGGAGGTCCGTGACCAGCCGATC GGCTTCTCGGCGGCTCACCG
Downstream 100 bases:
>100_bases CCCGCCTTCAACGGAGTGCTTTGGCCAACCTGGTCACCCCCTCCGCGATCTCCGCCGGGCTGTGCGTCGTGAAGGACAAC CGCAGCGTCGCGGCATCCGC
Product: putative thioredoxin-disulfide reductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Reductase; Thioredoxin-Disulfide Reductase; Thioredoxin Reductase; FAD Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Domain Protein; Methyltransferase Type; Pyridine Nucleotide-Disulphide Oxidoreductase Class II
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MAVHQALLRRQWSEDVVLFPHTGPDPTAEEAEQLAARSIRVVPGAVEALETANDRLESVRLHHGEVFPRRALAVAPRFTT RTAILGALGLESTDLALNGHVIGRQVQSDPTGATQAAGVWIAGNVADVVASVITASAAGVKAAAALNADLIAEKIRLAVA ARRTGCVPSGWPAFNG
Sequences:
>Translated_176_residues MAVHQALLRRQWSEDVVLFPHTGPDPTAEEAEQLAARSIRVVPGAVEALETANDRLESVRLHHGEVFPRRALAVAPRFTT RTAILGALGLESTDLALNGHVIGRQVQSDPTGATQAAGVWIAGNVADVVASVITASAAGVKAAAALNADLIAEKIRLAVA ARRTGCVPSGWPAFNG >Mature_175_residues AVHQALLRRQWSEDVVLFPHTGPDPTAEEAEQLAARSIRVVPGAVEALETANDRLESVRLHHGEVFPRRALAVAPRFTTR TAILGALGLESTDLALNGHVIGRQVQSDPTGATQAAGVWIAGNVADVVASVITASAAGVKAAAALNADLIAEKIRLAVAA RRTGCVPSGWPAFNG
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18349; Mature: 18218
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHQALLRRQWSEDVVLFPHTGPDPTAEEAEQLAARSIRVVPGAVEALETANDRLESVR CHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH LHHGEVFPRRALAVAPRFTTRTAILGALGLESTDLALNGHVIGRQVQSDPTGATQAAGVW HHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCEEECCEEECCCCCCCCCCCCHHCCEE IAGNVADVVASVITASAAGVKAAAALNADLIAEKIRLAVAARRTGCVPSGWPAFNG EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AVHQALLRRQWSEDVVLFPHTGPDPTAEEAEQLAARSIRVVPGAVEALETANDRLESVR HHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH LHHGEVFPRRALAVAPRFTTRTAILGALGLESTDLALNGHVIGRQVQSDPTGATQAAGVW HHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCEEECCEEECCCCCCCCCCCCHHCCEE IAGNVADVVASVITASAAGVKAAAALNADLIAEKIRLAVAARRTGCVPSGWPAFNG EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA