| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313491
Identifier: 158313491
GI number: 158313491
Start: 1976016
End: 1978445
Strand: Direct
Name: 158313491
Synonym: Franean1_1655
Alternate gene names: NA
Gene position: 1976016-1978445 (Clockwise)
Preceding gene: 158313490
Following gene: 158313495
Centisome position: 22.0
GC content: 75.27
Gene sequence:
>2430_bases ATGAACCCCGCCGGGCCGCTGGTACGGGTCGTGCTCGCCGGTGTCGGCCGGCGCCGGGCGCAGGCGTCGGTGGTGGCTCT GACCACGCTGCTCGCCGTGACGGCCTCGGTGCTCGCGCTCGGTCTGATCGCCGGGTCGCGCGCACCGTTCGACCGCGCGT TCGCAGCCCAGCACGGCGCGCACCTCACGGTCCAGTTCGACGCGACGAAGGTGACGGCCGCGCGGCTCGCCGCCACCGGG TCGGCGGCGCCGGTGGCGCAGGCTGCCGGCCCGTTCCCCGTCGCCGAGCTGCGGCCCCGGATCGTCGGCGGCCCGCCGGG ACTGCCCGTCGGGCTCGGACTGCCATCCCTGACCGTGGTCGGTCGGAACCAGCCGGACAGCGGCCCCGATTCGATCGACC AGGTCGCTGTCATCGAGGGCCGATGGGCCACCAACCGAGGAGAGATCGTTCTCGACCCGGACTCCCTGCCACCCTCGCTG CTCGGCGCCCGCCTCCAGCTGCCCGACCTGCCCGGAGCCCCCGTGCTGACCGTGGTGGGTCTCGCTCACTCGGCCGGTGG CAGCGCCCGGGCCTGGGTCGCGCCGGACGCCCTGGCGGCGTTCGCCTCGCGGGACGTCCCGGCGGGCCTCCAGATGCTCT ACCGGCTCACCGCCGCCGGCACCGAGAACGCGATCGACTCCGGCCGGGCGGCGATCTCGGCGGGGATGCCCGCCGGCGCG GTGACCGGGACCAGGTCCTACCTGGACGTCCGGGCGGGCGCGCTCGTCCGGACCGCGGTGTTCACGCCGTTCGTGGCCGC GTTCGGCGTGCTCGGCCTGGCCATGTCCGTGCTGATCGTCGGCACCGTCGTCGCGGGTGGCGTCGGCGCGACGATCTGGC GCACCGGGGTGCTGAGATCGCTGGGACTCACCCCGGCCCAGGCGGCCGGAGCACACGTCGCCCAGGTGCTCGTCCCGGCC ACGGGCGGTGTCGGCCTCGGCATCCTGTGCGGCAACCTGCTCGCCATGGTGGTCTTCGCCGGGTCGGCGGCCGCCTACGG CGCCGTCGCGCCGTCCGTGCCGCTCTGGGTCGACGCGGCCGTCGGCGCGGGCGCGCTCGCGCTCGTCGCCGTCGCCGCGC TGCTGCCCGCCCTGCACGCCGGGCGACGCAGCCCCGTCGACGCGATGCGGCTCGGGCGCGTGCCCCGACCGGGCCGCGGT CGGTGGGCGGGCCGGCTCGCCGCCCGGCTGCCGCTGCCACGGCCGTTGAACCTGGGGCTCGCCCATCCGTTCGCCCGTCC CGCCCGCTCGGGCGTGCTCGCCGTCGCGGTGGGCTTCGGGGCGCTGGGGGTCTCGTTCGCGGTCGGCCTGGCCTCGACAC TCGACTCCATCGCGGCGGACAACAGCCGGGACGAGGCCGGAGCGGTCGTCGTGAGCACCCACGTCCGGGTGGCGCATGGC CCGAAGGCGGGAGCCGCGGCACCGGGGCCGGCACAGGCACCGGTCGCGGCGGGTGAGGTGGCGGACGCGGGCGATGCCGC GGACGTGGCCAAGGTGATCGCGGCGCAGCCGGGTACCGCCCGCTTCTTCACCAGCGCGCACGCCGAGGTGTACGCGCTCG GGATCGTCGGGCCGGTGACGGTCACCGCCCACACCGGCGACTCATCCTGGGGCGCACGTCCGATGATCTCCGGTGACTGG TTCCGGGGGCCGGGCGAGGCGGTCGCCGACACGCGGTTCCTGGACGAGACCGGCACGGGGATCGGCGACACCGTGACCGT CACCGACCACGGGGCGTCGGTGGCCCTGCGGATCGTCGGCGAGGTCTTCGATCTCGATGACGACACTGTCGACCTCGCCA CCGACGAGACCTCGCTGCGCGGTCTCGATCTCGGCCTGGCCGTCGACAGTTTCAGCATCGATCTCCAGCCGGGGACCGAC CTGGTGCGCTATGTCGACACCCTGCAGGAAGCGCTCGCCTCCCACCCGGCGGTGGTGCGGGCGAACATCGAGGAGGGCTC CGAAGTGATCGCGGTCATGGACGCGCTGATCGCCTCGCTCACGCTGCTCCTGGTGGTCGTCGCGGGCCTCGGCGTGCTCA ACACCGTCGTCCTGGACACCCGGGAGCGTGTCCACGACCTCGGTGTCGTCAAGGCGGTGGGCATGACGCCGCGGCAGGTC CTCGCGATGGTGCTGACCTCGGCCGGGGGCATCGGCGTCTGCGCCGCGGCGATAGGGGTGCCGGCCGGCGTCGCGCTGCA CCACCGCGTCGTCCCGCTGATGGGCACGGCCGCCAGGACCGGCATGCCACGGGCGTACATCGACGTGTACGGCCCAGTGG CCGCAGCCCTGCTGGTCCTCGGCGGCCTGCTGATCGCGGTGCTCGGCGCCCTGGTCCCGGCCGGCTGGGCGGCCGGGACC AGGGCCACGACCGCGCTGCGGGCCGAATGA
Upstream 100 bases:
>100_bases ACGCTGAGACGACAGCAGCCTGCGGCACCGACGGGTCCGCCGTCGGCGGGATCGGCGGGACCGGCGGGACCGTGACCGGT GGCCCGGCGCCGGTGTCCCG
Downstream 100 bases:
>100_bases CGTGGATCCGCCCGGTCAGTGCTGGTTGATCAGGTATGCCACGTCGTTCTCGATGATCCGGTCCAGGTGCTCGGAGAGGA CCGGATGGCCGGTGAACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 809; Mature: 809
Protein sequence:
>809_residues MNPAGPLVRVVLAGVGRRRAQASVVALTTLLAVTASVLALGLIAGSRAPFDRAFAAQHGAHLTVQFDATKVTAARLAATG SAAPVAQAAGPFPVAELRPRIVGGPPGLPVGLGLPSLTVVGRNQPDSGPDSIDQVAVIEGRWATNRGEIVLDPDSLPPSL LGARLQLPDLPGAPVLTVVGLAHSAGGSARAWVAPDALAAFASRDVPAGLQMLYRLTAAGTENAIDSGRAAISAGMPAGA VTGTRSYLDVRAGALVRTAVFTPFVAAFGVLGLAMSVLIVGTVVAGGVGATIWRTGVLRSLGLTPAQAAGAHVAQVLVPA TGGVGLGILCGNLLAMVVFAGSAAAYGAVAPSVPLWVDAAVGAGALALVAVAALLPALHAGRRSPVDAMRLGRVPRPGRG RWAGRLAARLPLPRPLNLGLAHPFARPARSGVLAVAVGFGALGVSFAVGLASTLDSIAADNSRDEAGAVVVSTHVRVAHG PKAGAAAPGPAQAPVAAGEVADAGDAADVAKVIAAQPGTARFFTSAHAEVYALGIVGPVTVTAHTGDSSWGARPMISGDW FRGPGEAVADTRFLDETGTGIGDTVTVTDHGASVALRIVGEVFDLDDDTVDLATDETSLRGLDLGLAVDSFSIDLQPGTD LVRYVDTLQEALASHPAVVRANIEEGSEVIAVMDALIASLTLLLVVVAGLGVLNTVVLDTRERVHDLGVVKAVGMTPRQV LAMVLTSAGGIGVCAAAIGVPAGVALHHRVVPLMGTAARTGMPRAYIDVYGPVAAALLVLGGLLIAVLGALVPAGWAAGT RATTALRAE
Sequences:
>Translated_809_residues MNPAGPLVRVVLAGVGRRRAQASVVALTTLLAVTASVLALGLIAGSRAPFDRAFAAQHGAHLTVQFDATKVTAARLAATG SAAPVAQAAGPFPVAELRPRIVGGPPGLPVGLGLPSLTVVGRNQPDSGPDSIDQVAVIEGRWATNRGEIVLDPDSLPPSL LGARLQLPDLPGAPVLTVVGLAHSAGGSARAWVAPDALAAFASRDVPAGLQMLYRLTAAGTENAIDSGRAAISAGMPAGA VTGTRSYLDVRAGALVRTAVFTPFVAAFGVLGLAMSVLIVGTVVAGGVGATIWRTGVLRSLGLTPAQAAGAHVAQVLVPA TGGVGLGILCGNLLAMVVFAGSAAAYGAVAPSVPLWVDAAVGAGALALVAVAALLPALHAGRRSPVDAMRLGRVPRPGRG RWAGRLAARLPLPRPLNLGLAHPFARPARSGVLAVAVGFGALGVSFAVGLASTLDSIAADNSRDEAGAVVVSTHVRVAHG PKAGAAAPGPAQAPVAAGEVADAGDAADVAKVIAAQPGTARFFTSAHAEVYALGIVGPVTVTAHTGDSSWGARPMISGDW FRGPGEAVADTRFLDETGTGIGDTVTVTDHGASVALRIVGEVFDLDDDTVDLATDETSLRGLDLGLAVDSFSIDLQPGTD LVRYVDTLQEALASHPAVVRANIEEGSEVIAVMDALIASLTLLLVVVAGLGVLNTVVLDTRERVHDLGVVKAVGMTPRQV LAMVLTSAGGIGVCAAAIGVPAGVALHHRVVPLMGTAARTGMPRAYIDVYGPVAAALLVLGGLLIAVLGALVPAGWAAGT RATTALRAE >Mature_809_residues MNPAGPLVRVVLAGVGRRRAQASVVALTTLLAVTASVLALGLIAGSRAPFDRAFAAQHGAHLTVQFDATKVTAARLAATG SAAPVAQAAGPFPVAELRPRIVGGPPGLPVGLGLPSLTVVGRNQPDSGPDSIDQVAVIEGRWATNRGEIVLDPDSLPPSL LGARLQLPDLPGAPVLTVVGLAHSAGGSARAWVAPDALAAFASRDVPAGLQMLYRLTAAGTENAIDSGRAAISAGMPAGA VTGTRSYLDVRAGALVRTAVFTPFVAAFGVLGLAMSVLIVGTVVAGGVGATIWRTGVLRSLGLTPAQAAGAHVAQVLVPA TGGVGLGILCGNLLAMVVFAGSAAAYGAVAPSVPLWVDAAVGAGALALVAVAALLPALHAGRRSPVDAMRLGRVPRPGRG RWAGRLAARLPLPRPLNLGLAHPFARPARSGVLAVAVGFGALGVSFAVGLASTLDSIAADNSRDEAGAVVVSTHVRVAHG PKAGAAAPGPAQAPVAAGEVADAGDAADVAKVIAAQPGTARFFTSAHAEVYALGIVGPVTVTAHTGDSSWGARPMISGDW FRGPGEAVADTRFLDETGTGIGDTVTVTDHGASVALRIVGEVFDLDDDTVDLATDETSLRGLDLGLAVDSFSIDLQPGTD LVRYVDTLQEALASHPAVVRANIEEGSEVIAVMDALIASLTLLLVVVAGLGVLNTVVLDTRERVHDLGVVKAVGMTPRQV LAMVLTSAGGIGVCAAAIGVPAGVALHHRVVPLMGTAARTGMPRAYIDVYGPVAAALLVLGGLLIAVLGALVPAGWAAGT RATTALRAE
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80779; Mature: 80779
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPAGPLVRVVLAGVGRRRAQASVVALTTLLAVTASVLALGLIAGSRAPFDRAFAAQHGA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC HLTVQFDATKVTAARLAATGSAAPVAQAAGPFPVAELRPRIVGGPPGLPVGLGLPSLTVV EEEEEECCHHHHHHHHHHCCCCCCHHHCCCCCCHHHCCCCEECCCCCCCCCCCCCCEEEE GRNQPDSGPDSIDQVAVIEGRWATNRGEIVLDPDSLPPSLLGARLQLPDLPGAPVLTVVG ECCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHCCEEECCCCCCCCHHHHHH LAHSAGGSARAWVAPDALAAFASRDVPAGLQMLYRLTAAGTENAIDSGRAAISAGMPAGA HHHCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCCHHEECCCCCCC VTGTRSYLDVRAGALVRTAVFTPFVAAFGVLGLAMSVLIVGTVVAGGVGATIWRTGVLRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LGLTPAQAAGAHVAQVLVPATGGVGLGILCGNLLAMVVFAGSAAAYGAVAPSVPLWVDAA HCCCCHHHHHHHEEHHEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEECH VGAGALALVAVAALLPALHAGRRSPVDAMRLGRVPRPGRGRWAGRLAARLPLPRPLNLGL HCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCC AHPFARPARSGVLAVAVGFGALGVSFAVGLASTLDSIAADNSRDEAGAVVVSTHVRVAHG CCCCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEC PKAGAAAPGPAQAPVAAGEVADAGDAADVAKVIAAQPGTARFFTSAHAEVYALGIVGPVT CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHEECCCCEEEEEEEECCEE VTAHTGDSSWGARPMISGDWFRGPGEAVADTRFLDETGTGIGDTVTVTDHGASVALRIVG EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH EVFDLDDDTVDLATDETSLRGLDLGLAVDSFSIDLQPGTDLVRYVDTLQEALASHPAVVR HHHCCCCCCEEEECCCCCCCCEEEEEEEECEEEECCCCHHHHHHHHHHHHHHHCCCEEEE ANIEEGSEVIAVMDALIASLTLLLVVVAGLGVLNTVVLDTRERVHDLGVVKAVGMTPRQV EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LAMVLTSAGGIGVCAAAIGVPAGVALHHRVVPLMGTAARTGMPRAYIDVYGPVAAALLVL HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCCHHEEHHHHHHHHHHHH GGLLIAVLGALVPAGWAAGTRATTALRAE HHHHHHHHHHHHCCCCCCCCCCCCEEECC >Mature Secondary Structure MNPAGPLVRVVLAGVGRRRAQASVVALTTLLAVTASVLALGLIAGSRAPFDRAFAAQHGA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC HLTVQFDATKVTAARLAATGSAAPVAQAAGPFPVAELRPRIVGGPPGLPVGLGLPSLTVV EEEEEECCHHHHHHHHHHCCCCCCHHHCCCCCCHHHCCCCEECCCCCCCCCCCCCCEEEE GRNQPDSGPDSIDQVAVIEGRWATNRGEIVLDPDSLPPSLLGARLQLPDLPGAPVLTVVG ECCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHCCEEECCCCCCCCHHHHHH LAHSAGGSARAWVAPDALAAFASRDVPAGLQMLYRLTAAGTENAIDSGRAAISAGMPAGA HHHCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCCHHEECCCCCCC VTGTRSYLDVRAGALVRTAVFTPFVAAFGVLGLAMSVLIVGTVVAGGVGATIWRTGVLRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LGLTPAQAAGAHVAQVLVPATGGVGLGILCGNLLAMVVFAGSAAAYGAVAPSVPLWVDAA HCCCCHHHHHHHEEHHEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEECH VGAGALALVAVAALLPALHAGRRSPVDAMRLGRVPRPGRGRWAGRLAARLPLPRPLNLGL HCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCC AHPFARPARSGVLAVAVGFGALGVSFAVGLASTLDSIAADNSRDEAGAVVVSTHVRVAHG CCCCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEC PKAGAAAPGPAQAPVAAGEVADAGDAADVAKVIAAQPGTARFFTSAHAEVYALGIVGPVT CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHEECCCCEEEEEEEECCEE VTAHTGDSSWGARPMISGDWFRGPGEAVADTRFLDETGTGIGDTVTVTDHGASVALRIVG EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH EVFDLDDDTVDLATDETSLRGLDLGLAVDSFSIDLQPGTDLVRYVDTLQEALASHPAVVR HHHCCCCCCEEEECCCCCCCCEEEEEEEECEEEECCCCHHHHHHHHHHHHHHHCCCEEEE ANIEEGSEVIAVMDALIASLTLLLVVVAGLGVLNTVVLDTRERVHDLGVVKAVGMTPRQV EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LAMVLTSAGGIGVCAAAIGVPAGVALHHRVVPLMGTAARTGMPRAYIDVYGPVAAALLVL HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCCHHEEHHHHHHHHHHHH GGLLIAVLGALVPAGWAAGTRATTALRAE HHHHHHHHHHHHCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA