| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313427
Identifier: 158313427
GI number: 158313427
Start: 1899666
End: 1900727
Strand: Direct
Name: 158313427
Synonym: Franean1_1590
Alternate gene names: NA
Gene position: 1899666-1900727 (Clockwise)
Preceding gene: 158313423
Following gene: 158313428
Centisome position: 21.15
GC content: 76.65
Gene sequence:
>1062_bases ATGACGAAACGGGACGGACCCCCGCGCCACCGCCGCGCCACGCTCCTCGCCGCGGCCGCGCTCGCCGTGCTGCCGGCCGC GTCGCTGGTCGCGTGCGGCCCGGGAGAGTCGCTGCCGATCGCCGCCGGTGGCGCGGGCACGACACCAGGCACGGGCACCG GCACGGGGGGCGCACCGACGGACGGCGGCACGCCGTCGCCCGGCACCGCGCTCCCGGTCGGCAGGTCGACCCGGACGATC AGCGTCGGCGGTGTCCAACGGACGGTGCACGCCTACCGGCCGGCCGGGCTCACCGGGCCGGCGCCCCTCGTCGTCATGCT GCACGGCGGCTACGGCGGTGGAACCCAGGCCGAGGACTCCTACCACTGGGATCAGGCCGCCGACCGTGGCCGGTTCGTCG CCCTGTTTCCCGACGGCACGGACAAGTCGTGGAACGCCGGCGGCGGCTGCTGCGGCCCGGCCGCCCGGACGGGCGTCGAC GACGTCGCCTTCCTCAAGGAGGCCGTGGCCACGGTCCGCCGGCAGACCGGGATCGACCCGGACCGCGTCTACGTCTCCGG CGTGTCCAACGGCGGCGCGATGGCCTACCGGATGGCCTGCGAGACCGACCTCTTCGCCGCCGTCGGTGTGGACTCGACCA CGATGCTCGTCGACTGCGCCGGGGCGGCACCGGCGTCGGTCCTGCACATCCACGGCGCCGCCGACCCGGTGATCCGCTAC GACGGCGCGCCCGGCGAGCCCTACAGTCCGCGCAGCCCCGCGATCGACGGCCCGCCAGTGCCGGACGCGAACGCCGCCTG GCGGCGCATCGACCGCTGCGCCCCGCCCCGGACGACGACCTCGGGAGTACTGACGACCTCGACCGCGACCTGCCCGGAGG GCCGCGACGTCGAGCTGGTCACCATCGCGGGCGCGGGACACCAGTGGCCCGGGGCGACGCCGAACCCGCTCGCCGAGCGG CTCGGCGCCGGCACCCCGTCAACCGCCCTCGACGCCACCGAGACGATCTGGCGGTTCTTCGCCGACCACCCCCGTCCCCG TGCCGCCACCCCGCCGGCCTGA
Upstream 100 bases:
>100_bases TGGACATGTGAGTCACGTTAGCTCTCGGCCACGTCGACATTCCGGTCGCGCAGAAGTCCGCCGTTGCAAATAAGAAAGAC CCTTGCCTATTCTGCCGGGC
Downstream 100 bases:
>100_bases CCCCCGCACCCCATCGCGCTGACCCGCCCGCACCCGTCGGCCTGACGCGCCGCCGGGCCGCCGGGCCGGCCAAGCCGTCC TACCAGGGGCTATGCCCTAT
Product: poly(3-hydroxybutyrate) depolymerase-like protein
Products: NA
Alternate protein names: Polyhydroxybutyrate Depolymerase; Phospholipase/Carboxylesterase; Lipoprotein; Esterase; Lipoprotein LpqP; Secreted Hydrolase; Esterase Lipoprotein LpqC; Secreted Esterase; Esterase/Lipase/Thioesterase; Esterase Lipoprotein; Hydrolase; Feruloyl Esterase; Poly(3-Hydroxybutyrate) Depolymerase; Carbohydrate Esterase Family 1 Protein; Alpha/Beta Family Hydrolase; LOW QUALITY PROTEIN Esterase Lipoprotein LpqC; Esterase-Like Protein; Poly(3-Hydroxybutyrate) Depolymerase-Like; Secreted Protein
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPTDGGTPSPGTALPVGRSTRTI SVGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDSYHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVD DVAFLKEAVATVRRQTGIDPDRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRY DGAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELVTIAGAGHQWPGATPNPLAER LGAGTPSTALDATETIWRFFADHPRPRAATPPA
Sequences:
>Translated_353_residues MTKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPTDGGTPSPGTALPVGRSTRTI SVGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDSYHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVD DVAFLKEAVATVRRQTGIDPDRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRY DGAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELVTIAGAGHQWPGATPNPLAER LGAGTPSTALDATETIWRFFADHPRPRAATPPA >Mature_352_residues TKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPTDGGTPSPGTALPVGRSTRTIS VGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDSYHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVDD VAFLKEAVATVRRQTGIDPDRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRYD GAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELVTIAGAGHQWPGATPNPLAERL GAGTPSTALDATETIWRFFADHPRPRAATPPA
Specific function: Unknown
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35694; Mature: 35563
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPT CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCC DGGTPSPGTALPVGRSTRTISVGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDS CCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC YHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVDDVAFLKEAVATVRRQTGIDP CCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCC DRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRY CEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCEEEE DGAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEE TIAGAGHQWPGATPNPLAERLGAGTPSTALDATETIWRFFADHPRPRAATPPA EEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPT CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCC DGGTPSPGTALPVGRSTRTISVGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDS CCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC YHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVDDVAFLKEAVATVRRQTGIDP CCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCC DRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRY CEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCEEEE DGAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEE TIAGAGHQWPGATPNPLAERLGAGTPSTALDATETIWRFFADHPRPRAATPPA EEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA