| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313382
Identifier: 158313382
GI number: 158313382
Start: 1846027
End: 1846950
Strand: Direct
Name: 158313382
Synonym: Franean1_1545
Alternate gene names: NA
Gene position: 1846027-1846950 (Clockwise)
Preceding gene: 158313380
Following gene: 158313385
Centisome position: 20.55
GC content: 75.54
Gene sequence:
>924_bases ATGAAGGCGGCCGGGGGTAGCCGGACAGCCGTGCTGGTCTGCCAGGGCCGGGCGGTCGCGGCCGGGCGGATCGCTCCCGG CCGGTTCACCGACCCGGTCGCGGTCTCGCTCCTGCGGGCCGACGAGCAGCGCACGGTCGAGCAGGTGCGGGCTGGCACAC CGCCCTCCGGCTGGCTCGAACGTGTCGACTACGAGTCGGTGCGGGCCTGCGCGGAGATCGTCGTCCCGCGCACGATCGCG ATCGACGACGCGGTGCGCGAGCGGACCTCCCCGCAGGTCGTACTCCTCGGCGCCGGCCTGGACGACCGGGCGTGGCGCAT GCCGGAACTCGCCGACCGCGTTGTCTTCGAGGTCGACCACCCGGACTCCGCGCGCGACAAGCGTCAGCGGCTCGCCGGGC TGCCGGCGCCGACGCGGCCGACGCGGCCCGGGGAGCCCGGGGAGCCCGGGGAGCCCGGGGAGCGCGTGCGGTTCGTCTCC GTCGATCTCACCCGCGACCGGCTCGAAGGCGCCCTGGCCGCCGCCGGCCACCGGGCCGACACGCCCACGACCTGGATCTG GGAGGGTGTCGTCCCGTATCTCACCCGCCCGGAGGCCGCCCGGACCGTGGCCGCCGTCGCGACCCTGTCGGCCCCGGGCA GCCGGCTGATCGTCAACTATCAGGCCCCGCAGGCCGCGATCGCGATCGGGCAGCTGATCGCCCGCTCGATGGACGTCCTG GCCCGCCGCCGCGGGATCTGGGCGAACGAGCCTTGGAGGTCACGCTGGACGGCATCCGCGATGCGGGACCTGCTCGGCCG CAACGGCTTCACCGTGCGCAGCGACGATGACCTGCTCACCATCGCGACCAGGCTGACGACGCCCACGCCGCGTCGCGCCT CGCTGCGCAGCGGTCGGGTCGCCGTCGCCGACCGACCGGCCTGA
Upstream 100 bases:
>100_bases TGACGGGTCATGGACGCTGGAGACGGCAGGCGCGGTCGGCGGCGAACTGGCTGGCCGGGCGGCGGGGCAGGCACATGACG AGCCGGGTGGTGGGCGTGGC
Downstream 100 bases:
>100_bases GCGGACGTCCAGCCGGCGGGGCGGAATGTCAGGGGAACGCCCAGCGCAGGCCGTCGCGCAGTGCGGGCCGCCAGACGCCG AAGTCGTGGCCGCCGGGCCG
Product: putative methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MKAAGGSRTAVLVCQGRAVAAGRIAPGRFTDPVAVSLLRADEQRTVEQVRAGTPPSGWLERVDYESVRACAEIVVPRTIA IDDAVRERTSPQVVLLGAGLDDRAWRMPELADRVVFEVDHPDSARDKRQRLAGLPAPTRPTRPGEPGEPGEPGERVRFVS VDLTRDRLEGALAAAGHRADTPTTWIWEGVVPYLTRPEAARTVAAVATLSAPGSRLIVNYQAPQAAIAIGQLIARSMDVL ARRRGIWANEPWRSRWTASAMRDLLGRNGFTVRSDDDLLTIATRLTTPTPRRASLRSGRVAVADRPA
Sequences:
>Translated_307_residues MKAAGGSRTAVLVCQGRAVAAGRIAPGRFTDPVAVSLLRADEQRTVEQVRAGTPPSGWLERVDYESVRACAEIVVPRTIA IDDAVRERTSPQVVLLGAGLDDRAWRMPELADRVVFEVDHPDSARDKRQRLAGLPAPTRPTRPGEPGEPGEPGERVRFVS VDLTRDRLEGALAAAGHRADTPTTWIWEGVVPYLTRPEAARTVAAVATLSAPGSRLIVNYQAPQAAIAIGQLIARSMDVL ARRRGIWANEPWRSRWTASAMRDLLGRNGFTVRSDDDLLTIATRLTTPTPRRASLRSGRVAVADRPA >Mature_307_residues MKAAGGSRTAVLVCQGRAVAAGRIAPGRFTDPVAVSLLRADEQRTVEQVRAGTPPSGWLERVDYESVRACAEIVVPRTIA IDDAVRERTSPQVVLLGAGLDDRAWRMPELADRVVFEVDHPDSARDKRQRLAGLPAPTRPTRPGEPGEPGEPGERVRFVS VDLTRDRLEGALAAAGHRADTPTTWIWEGVVPYLTRPEAARTVAAVATLSAPGSRLIVNYQAPQAAIAIGQLIARSMDVL ARRRGIWANEPWRSRWTASAMRDLLGRNGFTVRSDDDLLTIATRLTTPTPRRASLRSGRVAVADRPA
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity [H]
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011610 - InterPro: IPR007213 [H]
Pfam domain/function: PF04072 LCM [H]
EC number: NA
Molecular weight: Translated: 33320; Mature: 33320
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAGGSRTAVLVCQGRAVAAGRIAPGRFTDPVAVSLLRADEQRTVEQVRAGTPPSGWLE CCCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHH RVDYESVRACAEIVVPRTIAIDDAVRERTSPQVVLLGAGLDDRAWRMPELADRVVFEVDH HCCHHHHHHHHHHHCCCEEEHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCEEEEECC PDSARDKRQRLAGLPAPTRPTRPGEPGEPGEPGERVRFVSVDLTRDRLEGALAAAGHRAD CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCC TPTTWIWEGVVPYLTRPEAARTVAAVATLSAPGSRLIVNYQAPQAAIAIGQLIARSMDVL CCCEEEECCCCHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH ARRRGIWANEPWRSRWTASAMRDLLGRNGFTVRSDDDLLTIATRLTTPTPRRASLRSGRV HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEHHCCCCCCCHHHCCCCE AVADRPA EECCCCC >Mature Secondary Structure MKAAGGSRTAVLVCQGRAVAAGRIAPGRFTDPVAVSLLRADEQRTVEQVRAGTPPSGWLE CCCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHH RVDYESVRACAEIVVPRTIAIDDAVRERTSPQVVLLGAGLDDRAWRMPELADRVVFEVDH HCCHHHHHHHHHHHCCCEEEHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCEEEEECC PDSARDKRQRLAGLPAPTRPTRPGEPGEPGEPGERVRFVSVDLTRDRLEGALAAAGHRAD CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCC TPTTWIWEGVVPYLTRPEAARTVAAVATLSAPGSRLIVNYQAPQAAIAIGQLIARSMDVL CCCEEEECCCCHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH ARRRGIWANEPWRSRWTASAMRDLLGRNGFTVRSDDDLLTIATRLTTPTPRRASLRSGRV HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEHHCCCCCCCHHHCCCCE AVADRPA EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA