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The map label for this gene is 158313380

Identifier: 158313380

GI number: 158313380

Start: 1843977

End: 1844687

Strand: Direct

Name: 158313380

Synonym: Franean1_1543

Alternate gene names: NA

Gene position: 1843977-1844687 (Clockwise)

Preceding gene: 158313377

Following gene: 158313382

Centisome position: 20.53

GC content: 70.89

Gene sequence:

>711_bases
ATGGACAGTGCGCGACGCGGCGGAAACCGTGTGGCGACGGCTGGGCGAGCCGGGAAGGTAGTCCCCGCGCTGCGGGTCGA
CGCGGAGCGTAACCGTGAACGCATTCTGCGGGCCGCCGAAGAAGTCTTCGCGGAACGCGGTATCGACGTCGGTCTGGAGG
AGATCGCCCGCCGGGCCGGGGTCGGGATCGCCACGCTCTACCGCCGCTTCCCGACCCGCGCCGACCTGCTCGAGGCAAGC
TTCGAAGGAAAGATCCGCGAGTACCTGGTGGCCGTGGGCCGGGCGCTGGAAAACCCGAGCGCGTGGGCGGGTTTCCGGCA
GCTCGTCGAGTACCTGTGCGGCGCTCAGGCGTCCAACGCGGGCCTGCGTGATCTGATCACCCTGCGGTTCCCGTCGTCCA
GCGTGGTCGAGGAACTCAAGGCGCAGGCACACGCCGGCCTGGAGGAGCTCATCGCGCGGGCCCAGCGGGAGGGCTCGCTA
CGGCCCGATTTCGTCGCCGCCGACATCGGCATCCTGCTGCTCGCGAACGCCGGCCTGGTCACCGCGACCCATGACGCGGC
GCCCGACGCGTGGCGCCGCTTCACCGCCTACCTGCTCGACGCCTTCCGTGCCGAGGGCACGGCGCGAACCGATCCCGTAC
CGGTTGCGCCCACCCCGGATCAGATCGAGCGCTCCGTGCAGAGCATGGTCACGACCGTCCGGCGCGGCTAG

Upstream 100 bases:

>100_bases
CGGGCGGTCGTGACGATTGGTATAAACGGAGGAGATCTTCCGGATAACCTTAGCAGGTTAAGTGGAGAGATACCTCCGTA
TATAAAGGTAGGCTCGTCAC

Downstream 100 bases:

>100_bases
GAGGCCCGGCCCGGCCCGGAGCCCTGCCCTGCCCGGCGTGGCGCGGGCGCAGGACGGCTCGAGGGCGGCCTGGGCGTGGC
GTGGCGCTCGGGTCAGGCCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator; TetR-Family Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; TetR-Type Regulator; Transcription Regulator Protein; TetR Family Protein Transcriptional Regulator; HTH-Type Transcriptional Regulator; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator Protein Tetr Family; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MDSARRGGNRVATAGRAGKVVPALRVDAERNRERILRAAEEVFAERGIDVGLEEIARRAGVGIATLYRRFPTRADLLEAS
FEGKIREYLVAVGRALENPSAWAGFRQLVEYLCGAQASNAGLRDLITLRFPSSSVVEELKAQAHAGLEELIARAQREGSL
RPDFVAADIGILLLANAGLVTATHDAAPDAWRRFTAYLLDAFRAEGTARTDPVPVAPTPDQIERSVQSMVTTVRRG

Sequences:

>Translated_236_residues
MDSARRGGNRVATAGRAGKVVPALRVDAERNRERILRAAEEVFAERGIDVGLEEIARRAGVGIATLYRRFPTRADLLEAS
FEGKIREYLVAVGRALENPSAWAGFRQLVEYLCGAQASNAGLRDLITLRFPSSSVVEELKAQAHAGLEELIARAQREGSL
RPDFVAADIGILLLANAGLVTATHDAAPDAWRRFTAYLLDAFRAEGTARTDPVPVAPTPDQIERSVQSMVTTVRRG
>Mature_236_residues
MDSARRGGNRVATAGRAGKVVPALRVDAERNRERILRAAEEVFAERGIDVGLEEIARRAGVGIATLYRRFPTRADLLEAS
FEGKIREYLVAVGRALENPSAWAGFRQLVEYLCGAQASNAGLRDLITLRFPSSSVVEELKAQAHAGLEELIARAQREGSL
RPDFVAADIGILLLANAGLVTATHDAAPDAWRRFTAYLLDAFRAEGTARTDPVPVAPTPDQIERSVQSMVTTVRRG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25633; Mature: 25633

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSARRGGNRVATAGRAGKVVPALRVDAERNRERILRAAEEVFAERGIDVGLEEIARRAG
CCCCCCCCCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
VGIATLYRRFPTRADLLEASFEGKIREYLVAVGRALENPSAWAGFRQLVEYLCGAQASNA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
GLRDLITLRFPSSSVVEELKAQAHAGLEELIARAQREGSLRPDFVAADIGILLLANAGLV
CHHHHEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCE
TATHDAAPDAWRRFTAYLLDAFRAEGTARTDPVPVAPTPDQIERSVQSMVTTVRRG
EECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSARRGGNRVATAGRAGKVVPALRVDAERNRERILRAAEEVFAERGIDVGLEEIARRAG
CCCCCCCCCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
VGIATLYRRFPTRADLLEASFEGKIREYLVAVGRALENPSAWAGFRQLVEYLCGAQASNA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
GLRDLITLRFPSSSVVEELKAQAHAGLEELIARAQREGSLRPDFVAADIGILLLANAGLV
CHHHHEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCE
TATHDAAPDAWRRFTAYLLDAFRAEGTARTDPVPVAPTPDQIERSVQSMVTTVRRG
EECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA