| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313373
Identifier: 158313373
GI number: 158313373
Start: 1837939
End: 1838367
Strand: Direct
Name: 158313373
Synonym: Franean1_1535
Alternate gene names: NA
Gene position: 1837939-1838367 (Clockwise)
Preceding gene: 158313372
Following gene: 158313374
Centisome position: 20.46
GC content: 71.1
Gene sequence:
>429_bases ATGAGAACCGCCGTGGCCGAGAATGTCGACGACGACCTCTGGTCCGCGATCGGGGACCCGACCCGGCGCCGGATGCTCGA CCTGCTGCTCAGCGAGGGCCACGGCACCGCGACCACGCTGAGCCAGCGGCTGCCGGTCACCCGCCAGGCGGTGGCCAAGC ACCTCGTCATCCTCGACCGGGTCGGCCTCGTCCACGCGACCCCGGCGGGCCGGGAGAAGCAGTATCGGGTGGACGGCGCC CAGCTCGCCCGCGCGGTGGCCCAACTGTCGTCCGTCGGGTCGGCGTGGGACGCCCGACTACAGCGGATCAGGCACATCGC CGAGTCGATCCAGCGCACCCAACGCGCCGTCGTCTTCGAGGATCATGAGGACGGCCCTGCCCCACCAGACAGGGGACATG CTCCGTCCGGGCCATGCCAGGGAGGATAA
Upstream 100 bases:
>100_bases AGATCGCCGTCCTCGAGCAGCAGTACCAGGAGCACGTCACCGGCTGGGACTTCTACCTGCCGCGGCTCGCGCCGTACGTC GCGACGCTTCAGCTGCGGCC
Downstream 100 bases:
>100_bases CGAGCACCGGTAGCCCGCGGCGGCCGTGAAAGCGGCCGCTCGGGTGCGCCTGATACGGACAATGCAACCATGGGTGTGCT GGAAGTGGTGGCGCCGAGTC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Arsr Family Transcriptional Regulator; Transcriptional Regulator ArsR
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRTAVAENVDDDLWSAIGDPTRRRMLDLLLSEGHGTATTLSQRLPVTRQAVAKHLVILDRVGLVHATPAGREKQYRVDGA QLARAVAQLSSVGSAWDARLQRIRHIAESIQRTQRAVVFEDHEDGPAPPDRGHAPSGPCQGG
Sequences:
>Translated_142_residues MRTAVAENVDDDLWSAIGDPTRRRMLDLLLSEGHGTATTLSQRLPVTRQAVAKHLVILDRVGLVHATPAGREKQYRVDGA QLARAVAQLSSVGSAWDARLQRIRHIAESIQRTQRAVVFEDHEDGPAPPDRGHAPSGPCQGG >Mature_142_residues MRTAVAENVDDDLWSAIGDPTRRRMLDLLLSEGHGTATTLSQRLPVTRQAVAKHLVILDRVGLVHATPAGREKQYRVDGA QLARAVAQLSSVGSAWDARLQRIRHIAESIQRTQRAVVFEDHEDGPAPPDRGHAPSGPCQGG
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15426; Mature: 15426
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAVAENVDDDLWSAIGDPTRRRMLDLLLSEGHGTATTLSQRLPVTRQAVAKHLVILDR CCCCHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH VGLVHATPAGREKQYRVDGAQLARAVAQLSSVGSAWDARLQRIRHIAESIQRTQRAVVFE CCCEECCCCCCCCHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEE DHEDGPAPPDRGHAPSGPCQGG CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTAVAENVDDDLWSAIGDPTRRRMLDLLLSEGHGTATTLSQRLPVTRQAVAKHLVILDR CCCCHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH VGLVHATPAGREKQYRVDGAQLARAVAQLSSVGSAWDARLQRIRHIAESIQRTQRAVVFE CCCEECCCCCCCCHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEE DHEDGPAPPDRGHAPSGPCQGG CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA