| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is katG
Identifier: 158313371
GI number: 158313371
Start: 1835124
End: 1837355
Strand: Direct
Name: katG
Synonym: Franean1_1533
Alternate gene names: 158313371
Gene position: 1835124-1837355 (Clockwise)
Preceding gene: 158313370
Following gene: 158313372
Centisome position: 20.43
GC content: 70.83
Gene sequence:
>2232_bases GTGTCCGAGAATCACGAGACAGTTGTTTCCGAACTGAACGAGGAAAGCGGTGGCGGCTGCCCGGTCGCGCATGAGCGGGC TCCGCATCCCACCCAGGGTGGCGGGAACCGTGGTTGGTGGCCGAACCGGCTCAACCTGAAGATCCTCGCCAAGAATCCCG CGGTGGCCAATCCGCTCGGTGAGGAGTTCGACTACGCCGCGGCGTTCCGGACGCTCGACCTCCCCGCCGTCAAGCGGGAC ATCGCGCAGGTGCTGACGACGTCGCAGGACTGGTGGCCGGCCGACTACGGTCACTACGGCCCGTTCATGATCAGGATGGC GTGGCACAGCGCGGGTACCTACCGCATCAGCGATGGCCGTGGTGGCGGCGGCGCCGGGCAGCAGCGTTTCGCGCCGCTCA ACAGCTGGCCGGACAACGGGAACCTGGACAAGGCGCGCCGCCTGCTGTGGCCGGTGAAGAAGAAGTACGGTCAGGCGCTC TCCTGGGCGGACCTGATGATTCTCGCCGGCAACGTCGCCCTGGAATCGATGGGTTTCACGACCTTCGGCTTCGCCGGTGG CCGCGAGGATGTCTGGGAGCCGGACGAGGACGTCTACTGGGGCCCGGAGACCACCTGGCTCGGCGACGAGCGCTACACCG GTGACCGGGAGCTCGAGAATCCGCTCGGGGCGGTCCAGATGGGCCTCATCTACGTCAACCCGGAGGGCCCGAACGGCACC CCGGACCCGCTGGCCGCGGCCCGCGACATCCGCGAGACGTTCCGCCGCATGGCGATGGACGACGAGGAGACGGTGGCGCT CATCGCCGGTGGCCACACGTTCGGCAAGACCCACGGCGCGGGCGACCCGGACAACGTCGGTCCGGAGCCCGAAGGTGCCC CCCTTGAGACGCAGGGCCTCGGCTGGAAGAACGCCTTCGGTACCGGCAAGGGCGCGGACGCGATCACCAGCGGGCTCGAG GGTGCCTGGACTCCCACCCCGGTGAGCTGGGACAACAGCTTCTTCGAGACGCTTTTCGGCTACGAGTGGGCGCTGACGAA GAGCCCGGCCGGGGCCTACCAGTGGAAGCCGAAGGGCGGCGCGGGCGCTGGCACCGTCCCCGATGCCCACGACGCGGCGA AGAGCCACGCCCCGACGATGCTGACGACCGACCTCGCCCTGCGGTTCGACCCGGTGTACGAGCCGATCTCGCGGCGGTTC CTGGAGCACCCGGACGAGCTCGCGGACGCGTTCGCCCGGGCGTGGTTCAAGCTGACCCACCGTGACATGGGGCCGGTCGC GCGCTACCTCGGCCCGGAGGTCCCGGCCGAGACGCTGCTGTGGCAGGACCCGGTGCCGGCGGTGGACCACGAGCTCGTCG ACGCCGCGGACGTCGCCGCGCTGAAGGTCCGGGTCCTCGCCTCGGGCCTGTCGGTCTCCGAGCTGGTCGCGACCGCGTGG GCGTCGGCCTCGACGTTCCGTGGCGGTGACAAGCGCGGTGGTGCCAACGGCGCGCGCATCCGCCTCGAGCCGCAGCGCGG CTGGGAGGTGAACGAGCCGGACCGGCTGGCGGCGGTGCTGGGGACGCTGACCGGCATCCAGGAGGAGTTCCACGCCGCCC GGACCGACGGCCGGCGGGTCTCGCTCGCCGACCTGATCGTGCTCGCCGGTGGTGCCGCTGTCGAGCAGGCAGCCCGCGAA GCCGGCTTCGACGTCGAGGTCCCGTTCACCCCGGGCCGGACCGACGCGTCCCAGGAGCTGACCGACGTCGAGTCGTTCGC GGCGCTCGAACCGGCCGCGGACGGGTTCCGTAACTACCTCGGGAAGGGCCAGCGCCTGCCGGCCGAGTACCTGCTGCTCG ACCGGGCGAACCTGCTGACCCTGAGCGCCCCCGAGCTGACGGTCCTCGTCGGTGGCCTGCGGGTGCTGGGGGCGAACTTC CGGCAGTCCTCGCTGGGGGTCCTCACCGCGACGCCCGGGGTGTTGACCAACGACTTCTTCGCCAACCTGCTCGACCTGGG CACGACGTGGCGCCCGAGCGGCGAGGACGACAACGTCTTCGAGGGCCGCGACGCCGCCACGGGCGAGCTGACCTGGACCG GTAGCCGCGTCGACCTCGTCTTCGGCTCGAACTCCGAGCTGCGCGCGTTCGCGGAGGTGTACGCGAGCGACGACGCGCGG GAGAAGTTCGTACGCGACTTCGTCGCGGCCTGGGCCAAGGTGATGAACCTCGACCGCTACGACCTCGCCTGA
Upstream 100 bases:
>100_bases CCTACCCGCTCCCGATCCGACCCCCATCCGTCCCGACCGTTCCTGATCCGTCCCTGTCCGCTTTCGATCCGCTGCTGATC CGCCAACGACGGAGGATCCT
Downstream 100 bases:
>100_bases TCCCGCTGCCTGGGTGGCCCCGCCGGGCCACCCAGGCAGCCGTCGAGGTGAGAAGCAACCGATGGTTGCTGGATGTCGCC CTGCCGGGTAACCTGACAAG
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MSENHETVVSELNEESGGGCPVAHERAPHPTQGGGNRGWWPNRLNLKILAKNPAVANPLGEEFDYAAAFRTLDLPAVKRD IAQVLTTSQDWWPADYGHYGPFMIRMAWHSAGTYRISDGRGGGGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQAL SWADLMILAGNVALESMGFTTFGFAGGREDVWEPDEDVYWGPETTWLGDERYTGDRELENPLGAVQMGLIYVNPEGPNGT PDPLAAARDIRETFRRMAMDDEETVALIAGGHTFGKTHGAGDPDNVGPEPEGAPLETQGLGWKNAFGTGKGADAITSGLE GAWTPTPVSWDNSFFETLFGYEWALTKSPAGAYQWKPKGGAGAGTVPDAHDAAKSHAPTMLTTDLALRFDPVYEPISRRF LEHPDELADAFARAWFKLTHRDMGPVARYLGPEVPAETLLWQDPVPAVDHELVDAADVAALKVRVLASGLSVSELVATAW ASASTFRGGDKRGGANGARIRLEPQRGWEVNEPDRLAAVLGTLTGIQEEFHAARTDGRRVSLADLIVLAGGAAVEQAARE AGFDVEVPFTPGRTDASQELTDVESFAALEPAADGFRNYLGKGQRLPAEYLLLDRANLLTLSAPELTVLVGGLRVLGANF RQSSLGVLTATPGVLTNDFFANLLDLGTTWRPSGEDDNVFEGRDAATGELTWTGSRVDLVFGSNSELRAFAEVYASDDAR EKFVRDFVAAWAKVMNLDRYDLA
Sequences:
>Translated_743_residues MSENHETVVSELNEESGGGCPVAHERAPHPTQGGGNRGWWPNRLNLKILAKNPAVANPLGEEFDYAAAFRTLDLPAVKRD IAQVLTTSQDWWPADYGHYGPFMIRMAWHSAGTYRISDGRGGGGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQAL SWADLMILAGNVALESMGFTTFGFAGGREDVWEPDEDVYWGPETTWLGDERYTGDRELENPLGAVQMGLIYVNPEGPNGT PDPLAAARDIRETFRRMAMDDEETVALIAGGHTFGKTHGAGDPDNVGPEPEGAPLETQGLGWKNAFGTGKGADAITSGLE GAWTPTPVSWDNSFFETLFGYEWALTKSPAGAYQWKPKGGAGAGTVPDAHDAAKSHAPTMLTTDLALRFDPVYEPISRRF LEHPDELADAFARAWFKLTHRDMGPVARYLGPEVPAETLLWQDPVPAVDHELVDAADVAALKVRVLASGLSVSELVATAW ASASTFRGGDKRGGANGARIRLEPQRGWEVNEPDRLAAVLGTLTGIQEEFHAARTDGRRVSLADLIVLAGGAAVEQAARE AGFDVEVPFTPGRTDASQELTDVESFAALEPAADGFRNYLGKGQRLPAEYLLLDRANLLTLSAPELTVLVGGLRVLGANF RQSSLGVLTATPGVLTNDFFANLLDLGTTWRPSGEDDNVFEGRDAATGELTWTGSRVDLVFGSNSELRAFAEVYASDDAR EKFVRDFVAAWAKVMNLDRYDLA >Mature_742_residues SENHETVVSELNEESGGGCPVAHERAPHPTQGGGNRGWWPNRLNLKILAKNPAVANPLGEEFDYAAAFRTLDLPAVKRDI AQVLTTSQDWWPADYGHYGPFMIRMAWHSAGTYRISDGRGGGGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQALS WADLMILAGNVALESMGFTTFGFAGGREDVWEPDEDVYWGPETTWLGDERYTGDRELENPLGAVQMGLIYVNPEGPNGTP DPLAAARDIRETFRRMAMDDEETVALIAGGHTFGKTHGAGDPDNVGPEPEGAPLETQGLGWKNAFGTGKGADAITSGLEG AWTPTPVSWDNSFFETLFGYEWALTKSPAGAYQWKPKGGAGAGTVPDAHDAAKSHAPTMLTTDLALRFDPVYEPISRRFL EHPDELADAFARAWFKLTHRDMGPVARYLGPEVPAETLLWQDPVPAVDHELVDAADVAALKVRVLASGLSVSELVATAWA SASTFRGGDKRGGANGARIRLEPQRGWEVNEPDRLAAVLGTLTGIQEEFHAARTDGRRVSLADLIVLAGGAAVEQAAREA GFDVEVPFTPGRTDASQELTDVESFAALEPAADGFRNYLGKGQRLPAEYLLLDRANLLTLSAPELTVLVGGLRVLGANFR QSSLGVLTATPGVLTNDFFANLLDLGTTWRPSGEDDNVFEGRDAATGELTWTGSRVDLVFGSNSELRAFAEVYASDDARE KFVRDFVAAWAKVMNLDRYDLA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=734, Percent_Identity=60.0817438692098, Blast_Score=827, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_FRASN (A8LBC6)
Other databases:
- EMBL: CP000820 - RefSeq: YP_001505879.1 - PeroxiBase: 2353 - GeneID: 5669937 - GenomeReviews: CP000820_GR - KEGG: fre:Franean1_1533 - HOGENOM: HBG285610 - OMA: FEWELTK - ProtClustDB: PRK15061 - BioCyc: FSP1855:FRANEAN1_1533-MONOMER - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 80421; Mature: 80290
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 109-109
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENHETVVSELNEESGGGCPVAHERAPHPTQGGGNRGWWPNRLNLKILAKNPAVANPLG CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC EEFDYAAAFRTLDLPAVKRDIAQVLTTSQDWWPADYGHYGPFMIRMAWHSAGTYRISDGR HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCC GGGGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQALSWADLMILAGNVALESMGFT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCCE TFGFAGGREDVWEPDEDVYWGPETTWLGDERYTGDRELENPLGAVQMGLIYVNPEGPNGT EEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCC PDPLAAARDIRETFRRMAMDDEETVALIAGGHTFGKTHGAGDPDNVGPEPEGAPLETQGL CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWKNAFGTGKGADAITSGLEGAWTPTPVSWDNSFFETLFGYEWALTKSPAGAYQWKPKGG CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCEEECCCCC AGAGTVPDAHDAAKSHAPTMLTTDLALRFDPVYEPISRRFLEHPDELADAFARAWFKLTH CCCCCCCCHHHHHHHCCCEEEEEHHHEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RDMGPVARYLGPEVPAETLLWQDPVPAVDHELVDAADVAALKVRVLASGLSVSELVATAW HHHHHHHHHHCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ASASTFRGGDKRGGANGARIRLEPQRGWEVNEPDRLAAVLGTLTGIQEEFHAARTDGRRV HCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE SLADLIVLAGGAAVEQAAREAGFDVEVPFTPGRTDASQELTDVESFAALEPAADGFRNYL EHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH GKGQRLPAEYLLLDRANLLTLSAPELTVLVGGLRVLGANFRQSSLGVLTATPGVLTNDFF CCCCCCCHHHHEECCCCEEEECCCCCEEHEHHHHHHCCCCCCCCCCEEEECCCCHHHHHH ANLLDLGTTWRPSGEDDNVFEGRDAATGELTWTGSRVDLVFGSNSELRAFAEVYASDDAR HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCHHH EKFVRDFVAAWAKVMNLDRYDLA HHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure SENHETVVSELNEESGGGCPVAHERAPHPTQGGGNRGWWPNRLNLKILAKNPAVANPLG CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC EEFDYAAAFRTLDLPAVKRDIAQVLTTSQDWWPADYGHYGPFMIRMAWHSAGTYRISDGR HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCC GGGGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQALSWADLMILAGNVALESMGFT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCCE TFGFAGGREDVWEPDEDVYWGPETTWLGDERYTGDRELENPLGAVQMGLIYVNPEGPNGT EEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCC PDPLAAARDIRETFRRMAMDDEETVALIAGGHTFGKTHGAGDPDNVGPEPEGAPLETQGL CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWKNAFGTGKGADAITSGLEGAWTPTPVSWDNSFFETLFGYEWALTKSPAGAYQWKPKGG CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCEEECCCCC AGAGTVPDAHDAAKSHAPTMLTTDLALRFDPVYEPISRRFLEHPDELADAFARAWFKLTH CCCCCCCCHHHHHHHCCCEEEEEHHHEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RDMGPVARYLGPEVPAETLLWQDPVPAVDHELVDAADVAALKVRVLASGLSVSELVATAW HHHHHHHHHHCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ASASTFRGGDKRGGANGARIRLEPQRGWEVNEPDRLAAVLGTLTGIQEEFHAARTDGRRV HCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE SLADLIVLAGGAAVEQAAREAGFDVEVPFTPGRTDASQELTDVESFAALEPAADGFRNYL EHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH GKGQRLPAEYLLLDRANLLTLSAPELTVLVGGLRVLGANFRQSSLGVLTATPGVLTNDFF CCCCCCCHHHHEECCCCEEEECCCCCEEHEHHHHHHCCCCCCCCCCEEEECCCCHHHHHH ANLLDLGTTWRPSGEDDNVFEGRDAATGELTWTGSRVDLVFGSNSELRAFAEVYASDDAR HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCHHH EKFVRDFVAAWAKVMNLDRYDLA HHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA