| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fur [H]
Identifier: 158313370
GI number: 158313370
Start: 1834483
End: 1835007
Strand: Direct
Name: fur [H]
Synonym: Franean1_1532
Alternate gene names: 158313370
Gene position: 1834483-1835007 (Clockwise)
Preceding gene: 158313368
Following gene: 158313371
Centisome position: 20.42
GC content: 70.29
Gene sequence:
>525_bases GTGGTGGCCTGGTTACTTTCTGGTTTTCTTGACTGGTTCCAGAAAATGGGTGACCATGTGGTGGTGGCCACAGCGGAGGA CTTCCGGCGGATGTTGCGCGGGGCCGCGCTGCGCGTCACCCGTCCGCGGGTGGCGGTGCTGACGGCGGTCTACGCGCATC CGCACGCGGACACCGACTCGATCGTCGGTTCCGTGCGCGAGGAGCTGCCTGAGGTGTCCCACCAGGCGGTGTACGACTCG CTGCGGGTTCTCACGACGGCCGGCCTGGTCCGGCGTATCCAGCCGGCCGGCTCGGCGGCCCGTTACGAGTCGCGGGTGGG GGACAACCACCATCACGTCGTGTGCCGGTCCTGTCGTGCCATCGCCGATGTCGACTGCGCGGTCGGCTCGGCGCCCTGCC TGGCCGCGTCCGACGACCGCGGCTTCTCGATAGACGAGGCCGAGGTCTTCTACTGGGGCCGGTGCCCCGACTGCTCCCCG CCGGCGACGCCTGACCGCCCCCGAGCCGCCCCTGACCGCTCCTGA
Upstream 100 bases:
>100_bases GGGTCACCGCAAACGCCCAGCTCAGACGCTCGCGCAGCCGCTTCGCGCCCACGGAGCCGGGGCCAGGGTCCGGTGGCCGG GAGCATATCGGGAGCTTGGA
Downstream 100 bases:
>100_bases CTCCTTCCGATCTGTCCCTACCCGCTCCCGATCCGACCCCCATCCGTCCCGACCGTTCCTGATCCGTCCCTGTCCGCTTT CGATCCGCTGCTGATCCGCC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MVAWLLSGFLDWFQKMGDHVVVATAEDFRRMLRGAALRVTRPRVAVLTAVYAHPHADTDSIVGSVREELPEVSHQAVYDS LRVLTTAGLVRRIQPAGSAARYESRVGDNHHHVVCRSCRAIADVDCAVGSAPCLAASDDRGFSIDEAEVFYWGRCPDCSP PATPDRPRAAPDRS
Sequences:
>Translated_174_residues MVAWLLSGFLDWFQKMGDHVVVATAEDFRRMLRGAALRVTRPRVAVLTAVYAHPHADTDSIVGSVREELPEVSHQAVYDS LRVLTTAGLVRRIQPAGSAARYESRVGDNHHHVVCRSCRAIADVDCAVGSAPCLAASDDRGFSIDEAEVFYWGRCPDCSP PATPDRPRAAPDRS >Mature_174_residues MVAWLLSGFLDWFQKMGDHVVVATAEDFRRMLRGAALRVTRPRVAVLTAVYAHPHADTDSIVGSVREELPEVSHQAVYDS LRVLTTAGLVRRIQPAGSAARYESRVGDNHHHVVCRSCRAIADVDCAVGSAPCLAASDDRGFSIDEAEVFYWGRCPDCSP PATPDRPRAAPDRS
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 19027; Mature: 19027
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAWLLSGFLDWFQKMGDHVVVATAEDFRRMLRGAALRVTRPRVAVLTAVYAHPHADTDS CHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCHHH IVGSVREELPEVSHQAVYDSLRVLTTAGLVRRIQPAGSAARYESRVGDNHHHVVCRSCRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHH IADVDCAVGSAPCLAASDDRGFSIDEAEVFYWGRCPDCSPPATPDRPRAAPDRS HHHHHHHCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVAWLLSGFLDWFQKMGDHVVVATAEDFRRMLRGAALRVTRPRVAVLTAVYAHPHADTDS CHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCHHH IVGSVREELPEVSHQAVYDSLRVLTTAGLVRRIQPAGSAARYESRVGDNHHHVVCRSCRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHH IADVDCAVGSAPCLAASDDRGFSIDEAEVFYWGRCPDCSPPATPDRPRAAPDRS HHHHHHHCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]