Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313368

Identifier: 158313368

GI number: 158313368

Start: 1832504

End: 1833715

Strand: Direct

Name: 158313368

Synonym: Franean1_1530

Alternate gene names: NA

Gene position: 1832504-1833715 (Clockwise)

Preceding gene: 158313366

Following gene: 158313370

Centisome position: 20.4

GC content: 61.14

Gene sequence:

>1212_bases
ATGCGGGAGATCCGAGCGTTGGGAGACCGCGTCGCTCAGGTACGAGTACGACGGTCCATGACCCAGGCCGAGCTAGCGGA
GCGGGCGGACGTATCCGTTGACCTGGTTACGAAGCTTGAGCAGGGGCAACGTGATGGAATCCGCATCACCACGTTGCATA
GCCTTGCCAGGGCGTTGGAAGTACCTACAGCAACGTTCTTCAAGGTGGAGGTGGAGACAGCGATGAGCGACAGCGAAGCG
CTGATGCCGCTCCGGCGGTTGCTACTACCCGGGCCCTCAGGCAGTCGGGCGGAGGAGCCTGCGCTTGGGCTCAGGCCGCT
ACGGGATCGGCTGGTTGCCCTGACTCAGGACTACCATCATGCCCGGTACTCGCAAGCGGTACGGACAGCTCCCGCGCTGA
TTGAGGACATCACGGCCGCGAGCGCTCTCCACCAAGGGGAAGATCAAGAAGCGGCTTACCGCCTTTTGTCGCATGCCTAC
ATCATGGCGGCAAGTGTGTTGATCCAGTTGGGGGGCGAAGACCTCGCGTGCGAGGCCATCCGGCGCAGCATGGAAGCGGC
AGACTCGGCCGGCGACCAGATTCTCCGTGCTAGTGGTGTGGTTTATTACCGCTGGGCTTTCATCAGACAAGGACGATTCG
ACGATGCCGAGAGAGTGGCCGTCGAGATGGCAGCAGAGATTGAGCCGTCAATCATGCGGTCCACCCCCGAACACCTAGGC
GTATGGGGTCGACTTATGACGGGTGCCAGCGCTGCCGCCGCGCGGAACAACCGTCCGGAAACTGCCAGTGAACTACTATC
GTACGCTCGGTCGTCGGCTGCGCGAATTGTCGATGGAAAGATGGACTATGCAAAATACTGGGCGGCATTTGGTCCATCTC
AGGTGGATGCAATAGAGGTGGAAAACGCCATGACTCAGGGAGACGCGCCCCGCGCGTTGCAACTGGCAGGGTCCGTCCAC
CGGACCGAAAATATGCCACTGAGTAACTGGACACGTCATCTGTTGGCCGTAGCGGAAGCCCAAACAGCCACCAGAGACTA
TCCCAATGCCATACGGACCGTACAGGAGGCCCGTACGTTGACCCCTGAATGGCTCCGAGAGCAGCGGCTAGCCGGGAAGG
TGGTTCGGGACCTCTTGGACGCGACCAGCGTCCGCCGTGCTCGCAAGAGCGGCCTAGCCGAGTTGGCTTCGTTCGTTGGG
GTTCAGCCCTAA

Upstream 100 bases:

>100_bases
GATCCTGATGACCTGGTCAGCACAAGAGAACCGACCGGGAGGGATAGGATGTTGCTACGGAGCGTGATGTGTAGGACGTA
GCGTCCTAGGGAGGTGACCC

Downstream 100 bases:

>100_bases
GGTTCCGGCCCTCACTCTCACGGTCCAGCTCGACCGGACCGACTGCCCGGTGCGGGGGGGTGAGACCTCCATGGTGCTTG
CTCTAGAAAGCGCCATGCAA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain Protein; PE-PGRS Family Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Containing Protein; Regulator Protein

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MREIRALGDRVAQVRVRRSMTQAELAERADVSVDLVTKLEQGQRDGIRITTLHSLARALEVPTATFFKVEVETAMSDSEA
LMPLRRLLLPGPSGSRAEEPALGLRPLRDRLVALTQDYHHARYSQAVRTAPALIEDITAASALHQGEDQEAAYRLLSHAY
IMAASVLIQLGGEDLACEAIRRSMEAADSAGDQILRASGVVYYRWAFIRQGRFDDAERVAVEMAAEIEPSIMRSTPEHLG
VWGRLMTGASAAAARNNRPETASELLSYARSSAARIVDGKMDYAKYWAAFGPSQVDAIEVENAMTQGDAPRALQLAGSVH
RTENMPLSNWTRHLLAVAEAQTATRDYPNAIRTVQEARTLTPEWLREQRLAGKVVRDLLDATSVRRARKSGLAELASFVG
VQP

Sequences:

>Translated_403_residues
MREIRALGDRVAQVRVRRSMTQAELAERADVSVDLVTKLEQGQRDGIRITTLHSLARALEVPTATFFKVEVETAMSDSEA
LMPLRRLLLPGPSGSRAEEPALGLRPLRDRLVALTQDYHHARYSQAVRTAPALIEDITAASALHQGEDQEAAYRLLSHAY
IMAASVLIQLGGEDLACEAIRRSMEAADSAGDQILRASGVVYYRWAFIRQGRFDDAERVAVEMAAEIEPSIMRSTPEHLG
VWGRLMTGASAAAARNNRPETASELLSYARSSAARIVDGKMDYAKYWAAFGPSQVDAIEVENAMTQGDAPRALQLAGSVH
RTENMPLSNWTRHLLAVAEAQTATRDYPNAIRTVQEARTLTPEWLREQRLAGKVVRDLLDATSVRRARKSGLAELASFVG
VQP
>Mature_403_residues
MREIRALGDRVAQVRVRRSMTQAELAERADVSVDLVTKLEQGQRDGIRITTLHSLARALEVPTATFFKVEVETAMSDSEA
LMPLRRLLLPGPSGSRAEEPALGLRPLRDRLVALTQDYHHARYSQAVRTAPALIEDITAASALHQGEDQEAAYRLLSHAY
IMAASVLIQLGGEDLACEAIRRSMEAADSAGDQILRASGVVYYRWAFIRQGRFDDAERVAVEMAAEIEPSIMRSTPEHLG
VWGRLMTGASAAAARNNRPETASELLSYARSSAARIVDGKMDYAKYWAAFGPSQVDAIEVENAMTQGDAPRALQLAGSVH
RTENMPLSNWTRHLLAVAEAQTATRDYPNAIRTVQEARTLTPEWLREQRLAGKVVRDLLDATSVRRARKSGLAELASFVG
VQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44337; Mature: 44337

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50943 HTH_CROC1 ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREIRALGDRVAQVRVRRSMTQAELAERADVSVDLVTKLEQGQRDGIRITTLHSLARALE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHH
VPTATFFKVEVETAMSDSEALMPLRRLLLPGPSGSRAEEPALGLRPLRDRLVALTQDYHH
CCCCEEEEEEEHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ARYSQAVRTAPALIEDITAASALHQGEDQEAAYRLLSHAYIMAASVLIQLGGEDLACEAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RRSMEAADSAGDQILRASGVVYYRWAFIRQGRFDDAERVAVEMAAEIEPSIMRSTPEHLG
HHHHHHHHHHHHHHHHHCCEEEEHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHH
VWGRLMTGASAAAARNNRPETASELLSYARSSAARIVDGKMDYAKYWAAFGPSQVDAIEV
HHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
ENAMTQGDAPRALQLAGSVHRTENMPLSNWTRHLLAVAEAQTATRDYPNAIRTVQEARTL
HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
TPEWLREQRLAGKVVRDLLDATSVRRARKSGLAELASFVGVQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MREIRALGDRVAQVRVRRSMTQAELAERADVSVDLVTKLEQGQRDGIRITTLHSLARALE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHH
VPTATFFKVEVETAMSDSEALMPLRRLLLPGPSGSRAEEPALGLRPLRDRLVALTQDYHH
CCCCEEEEEEEHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ARYSQAVRTAPALIEDITAASALHQGEDQEAAYRLLSHAYIMAASVLIQLGGEDLACEAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RRSMEAADSAGDQILRASGVVYYRWAFIRQGRFDDAERVAVEMAAEIEPSIMRSTPEHLG
HHHHHHHHHHHHHHHHHCCEEEEHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHH
VWGRLMTGASAAAARNNRPETASELLSYARSSAARIVDGKMDYAKYWAAFGPSQVDAIEV
HHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
ENAMTQGDAPRALQLAGSVHRTENMPLSNWTRHLLAVAEAQTATRDYPNAIRTVQEARTL
HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
TPEWLREQRLAGKVVRDLLDATSVRRARKSGLAELASFVGVQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA