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The map label for this gene is IS1086 [H]

Identifier: 158313305

GI number: 158313305

Start: 1762693

End: 1762977

Strand: Direct

Name: IS1086 [H]

Synonym: Franean1_1467

Alternate gene names: 158313305

Gene position: 1762693-1762977 (Clockwise)

Preceding gene: 158313304

Following gene: 158313307

Centisome position: 19.62

GC content: 64.91

Gene sequence:

>285_bases
ATGAGCCGCCACGACGAGTTCACCGCTGCCACCGGTGTCCCGGTCTACTTCTGCGAGCCCGCCAAACCCTGGCAACGCGG
CTCGAACGAAAACACGAACGTGCTGCTGCGCCAGTACTTCCCCGAGAGTACCGACCTGTCCGTCCACACCGCGGCCGATC
TGGCGGCCGTCGCTGCCGAACTCAACGCGCGGCCCCGCAAGATCCTCGGCTGGACGACTCCGGCGAGTCAGCTCGATAAG
CTCGTCGCAACACTCGACCTCCCGGATGTTGCAATGATCGGCTGA

Upstream 100 bases:

>100_bases
CGGCCGAGGTGCCGACCAAGTCCTCGACGCGCTCGTACGCGAGATCTCCGGCCTGCCCACCCCACTGGCGCGTTCGCTGA
CCTGGGATCAAGGTAGCGAG

Downstream 100 bases:

>100_bases
ATCCGCCCGCGGTGTCCCCACGCATCCGGAAGCAACATCAGCCCGAGAGTGTTGCGCGTCAGGGCGTAGAGCAGGGACCA
CACCATGACCATCCAGCCTG

Product: transposase, ISlxx5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSRHDEFTAATGVPVYFCEPAKPWQRGSNENTNVLLRQYFPESTDLSVHTAADLAAVAAELNARPRKILGWTTPASQLDK
LVATLDLPDVAMIG

Sequences:

>Translated_94_residues
MSRHDEFTAATGVPVYFCEPAKPWQRGSNENTNVLLRQYFPESTDLSVHTAADLAAVAAELNARPRKILGWTTPASQLDK
LVATLDLPDVAMIG
>Mature_93_residues
SRHDEFTAATGVPVYFCEPAKPWQRGSNENTNVLLRQYFPESTDLSVHTAADLAAVAAELNARPRKILGWTTPASQLDKL
VATLDLPDVAMIG

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790736, Length=86, Percent_Identity=55.8139534883721, Blast_Score=105, Evalue=7e-25,
Organism=Escherichia coli, GI1787671, Length=86, Percent_Identity=55.8139534883721, Blast_Score=105, Evalue=7e-25,
Organism=Escherichia coli, GI1786450, Length=86, Percent_Identity=55.8139534883721, Blast_Score=105, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 10269; Mature: 10137

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHDEFTAATGVPVYFCEPAKPWQRGSNENTNVLLRQYFPESTDLSVHTAADLAAVAAE
CCCCCCCEECCCCCEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHH
LNARPRKILGWTTPASQLDKLVATLDLPDVAMIG
CCCCCCEEEECCCCHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure 
SRHDEFTAATGVPVYFCEPAKPWQRGSNENTNVLLRQYFPESTDLSVHTAADLAAVAAE
CCCCCCEECCCCCEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHH
LNARPRKILGWTTPASQLDKLVATLDLPDVAMIG
CCCCCCEEEECCCCHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]