| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313297
Identifier: 158313297
GI number: 158313297
Start: 1755668
End: 1756501
Strand: Direct
Name: 158313297
Synonym: Franean1_1459
Alternate gene names: NA
Gene position: 1755668-1756501 (Clockwise)
Preceding gene: 158313294
Following gene: 158313298
Centisome position: 19.55
GC content: 63.67
Gene sequence:
>834_bases ATGGGATGGGACTTCAAGTCGGTGGCGCCTGACGCGGAAGAGAGCGGTCAGGTAGCCGATCTCAGGATGGACCGGCCGAC ACCGGCGCGCATGTATGACTACTTTCTCGGGGGCAAGGACAACTTCGAGGTCGACCGCGAGGCTGCTGCTGCTGTCGACG CCGCCCTCGGTAAGACGGTGACGTTTGACATCGTCTGGGAGAACCGGCGCTTCCTGCAGCGGGCGACCCGTTGGCTCGCG AACGCCGGTATCGGCCAGTTTCTCGACATCGGCACCGGCCTGCCGACCCAGGGGAATGTGCACGAGATAGCCCAGCAGGT CAACCCGGACGCGCACGTCGTCTACGTAGACAACGACCCGATCGTGCTCGCTCACGGCCGCGCGCTGCTGGCGACGAACA AGACGACGACAATCATCACCGCGGACGCACGCGAACCCGCGGGGATCCTCGCGCATCCGGACACGAACGCGCTCATCGAC TTTTCGCGACCCGTCGCCGTTCTGGCGGTCGCCTTGTTCCATTTCATTACGGATGAGGAGAACCCCGCCGGTCTTCTCGC CGAATTTATGGACGCCGTTCCATCGGGTTCCTACCTGGTGCTATCCCATCTGACAACGGATGGGCCGCCGGCTGAAGGTG TCGCCCGGACGGAGGCGGCGTATGAGAAGGCGACGTCGCCTATAGTCTTCCGGCCGCGTATCGCGATCGAGAATTTCTTC TCCGGGCTGGATCTGGTCGAACCCGGTATCGTTCGACCATGGCAGTGGCACCCGGGAGACGACGGCAGCCCTGAGACTGA CTGGCTGTCCGCAGGAGTAGCGCGCAAGCCTTGA
Upstream 100 bases:
>100_bases CCACTTTGGTGGGATGACCCACCCGATAGGCTGACGTGCAACGCCTACCTACCGAAGCCGCCGGGCCGTCGGTGCCGACC TCATGACTTGCGGAGCGATG
Downstream 100 bases:
>100_bases CGGCGGCTCCGCCGGACGCGACACCAGTCCGGCGGTGTCCGGGCAGCGGTCGCTGTCTTGGCCAGGCGTCCCCCAGCGGC ATCCTCGACCGCGTCGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MGWDFKSVAPDAEESGQVADLRMDRPTPARMYDYFLGGKDNFEVDREAAAAVDAALGKTVTFDIVWENRRFLQRATRWLA NAGIGQFLDIGTGLPTQGNVHEIAQQVNPDAHVVYVDNDPIVLAHGRALLATNKTTTIITADAREPAGILAHPDTNALID FSRPVAVLAVALFHFITDEENPAGLLAEFMDAVPSGSYLVLSHLTTDGPPAEGVARTEAAYEKATSPIVFRPRIAIENFF SGLDLVEPGIVRPWQWHPGDDGSPETDWLSAGVARKP
Sequences:
>Translated_277_residues MGWDFKSVAPDAEESGQVADLRMDRPTPARMYDYFLGGKDNFEVDREAAAAVDAALGKTVTFDIVWENRRFLQRATRWLA NAGIGQFLDIGTGLPTQGNVHEIAQQVNPDAHVVYVDNDPIVLAHGRALLATNKTTTIITADAREPAGILAHPDTNALID FSRPVAVLAVALFHFITDEENPAGLLAEFMDAVPSGSYLVLSHLTTDGPPAEGVARTEAAYEKATSPIVFRPRIAIENFF SGLDLVEPGIVRPWQWHPGDDGSPETDWLSAGVARKP >Mature_276_residues GWDFKSVAPDAEESGQVADLRMDRPTPARMYDYFLGGKDNFEVDREAAAAVDAALGKTVTFDIVWENRRFLQRATRWLAN AGIGQFLDIGTGLPTQGNVHEIAQQVNPDAHVVYVDNDPIVLAHGRALLATNKTTTIITADAREPAGILAHPDTNALIDF SRPVAVLAVALFHFITDEENPAGLLAEFMDAVPSGSYLVLSHLTTDGPPAEGVARTEAAYEKATSPIVFRPRIAIENFFS GLDLVEPGIVRPWQWHPGDDGSPETDWLSAGVARKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30084; Mature: 29953
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWDFKSVAPDAEESGQVADLRMDRPTPARMYDYFLGGKDNFEVDREAAAAVDAALGKTV CCCCCCCCCCCCHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEE TFDIVWENRRFLQRATRWLANAGIGQFLDIGTGLPTQGNVHEIAQQVNPDAHVVYVDNDP EEEEEECCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCC IVLAHGRALLATNKTTTIITADAREPAGILAHPDTNALIDFSRPVAVLAVALFHFITDEE EEEECCCEEEEECCEEEEEEECCCCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHCCCC NPAGLLAEFMDAVPSGSYLVLSHLTTDGPPAEGVARTEAAYEKATSPIVFRPRIAIENFF CCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHH SGLDLVEPGIVRPWQWHPGDDGSPETDWLSAGVARKP CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure GWDFKSVAPDAEESGQVADLRMDRPTPARMYDYFLGGKDNFEVDREAAAAVDAALGKTV CCCCCCCCCCCHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEE TFDIVWENRRFLQRATRWLANAGIGQFLDIGTGLPTQGNVHEIAQQVNPDAHVVYVDNDP EEEEEECCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCC IVLAHGRALLATNKTTTIITADAREPAGILAHPDTNALIDFSRPVAVLAVALFHFITDEE EEEECCCEEEEECCEEEEEEECCCCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHCCCC NPAGLLAEFMDAVPSGSYLVLSHLTTDGPPAEGVARTEAAYEKATSPIVFRPRIAIENFF CCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHH SGLDLVEPGIVRPWQWHPGDDGSPETDWLSAGVARKP CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA