| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313282
Identifier: 158313282
GI number: 158313282
Start: 1737308
End: 1738015
Strand: Direct
Name: 158313282
Synonym: Franean1_1442
Alternate gene names: NA
Gene position: 1737308-1738015 (Clockwise)
Preceding gene: 158313281
Following gene: 158313284
Centisome position: 19.34
GC content: 55.51
Gene sequence:
>708_bases ATGACGAACATGAAAATCGCTATCGAGGTCGGCCTCGTAGCTCTAGAAGTTGTCCTGATCTCGATAGCATTTCTGGTCAT TCCCCCACGAACAAGGACGAACCAGAGTCGGGGGCAGCGACTCACAAAGGTGGAGGCAGGAACACTCGCAGCAGTACTAG TCATAGCGGTTCTGGCGCCGATAGGAGCCGTAAACAGGTTCTCAGAGCGTCAGTCGCGATTGATTGTTCACCGATATACT CCGGTTGACCCTGTGTCGGGGGAGTTGCGAGCGGGACTGCAGGCAGAGTCTATGAGCGGCGAGTGCTGGACCCTATCCCT CGTCTCGAACAGCGCCGACGCCTTCCGCTGCATGTCAGGTCATTTTATATACGATCCGTGCTTCACGGCTTCCTGGGCAG AAGCGGTCTGCATTGCGGACCCATGGTCGACCGAGGTGGTGAGACTGAGTTTGACCAAGGATCCGCCTTTCACCGAGGAT GACCGTTTTAATAATAACGACGTCCCGCGGTGGGCGCTCATTCTAGAATCCGGAGACCTGTGTACCCGCGTTTCCGGTAT GAGAGGTGCCGTCGACGGGCAGCCCGTTTCTTATAGCTGTGTAAGTGGTACGCCGGTGATCGGGTTCGACGCCGAGCAAG AGAAAGTCAATCTCCGATCTGCATCGGGTTCGATTTCTAATGAACGGGTCCTAGTTGCGTGGATATAG
Upstream 100 bases:
>100_bases GCTTCTTGTAGAGACGAAGCGCCGCCTTAGAGAACTGGACCTGCGCGAGTCGCTAGGGTTCGTTCTCGCGGTTCTTGGTA TCGCGGTAGCGATCATTCAG
Downstream 100 bases:
>100_bases CGGGTCTAGTGCCGCCCCCGGGCGGGGGTGGCACTAGACCCTAGCTCGACCCCTGATCGCCAGCGATATCGGCCGACCAA TTCTTGTGAAACTACCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTNMKIAIEVGLVALEVVLISIAFLVIPPRTRTNQSRGQRLTKVEAGTLAAVLVIAVLAPIGAVNRFSERQSRLIVHRYT PVDPVSGELRAGLQAESMSGECWTLSLVSNSADAFRCMSGHFIYDPCFTASWAEAVCIADPWSTEVVRLSLTKDPPFTED DRFNNNDVPRWALILESGDLCTRVSGMRGAVDGQPVSYSCVSGTPVIGFDAEQEKVNLRSASGSISNERVLVAWI
Sequences:
>Translated_235_residues MTNMKIAIEVGLVALEVVLISIAFLVIPPRTRTNQSRGQRLTKVEAGTLAAVLVIAVLAPIGAVNRFSERQSRLIVHRYT PVDPVSGELRAGLQAESMSGECWTLSLVSNSADAFRCMSGHFIYDPCFTASWAEAVCIADPWSTEVVRLSLTKDPPFTED DRFNNNDVPRWALILESGDLCTRVSGMRGAVDGQPVSYSCVSGTPVIGFDAEQEKVNLRSASGSISNERVLVAWI >Mature_234_residues TNMKIAIEVGLVALEVVLISIAFLVIPPRTRTNQSRGQRLTKVEAGTLAAVLVIAVLAPIGAVNRFSERQSRLIVHRYTP VDPVSGELRAGLQAESMSGECWTLSLVSNSADAFRCMSGHFIYDPCFTASWAEAVCIADPWSTEVVRLSLTKDPPFTEDD RFNNNDVPRWALILESGDLCTRVSGMRGAVDGQPVSYSCVSGTPVIGFDAEQEKVNLRSASGSISNERVLVAWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25529; Mature: 25398
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNMKIAIEVGLVALEVVLISIAFLVIPPRTRTNQSRGQRLTKVEAGTLAAVLVIAVLAP CCCEEEEEEHHHHHHHHHHHHHHHHEECCCCCCCHHHCCEEEEECHHHHHHHHHHHHHHH IGAVNRFSERQSRLIVHRYTPVDPVSGELRAGLQAESMSGECWTLSLVSNSADAFRCMSG HHHHHHHHHHHHEEEEEECCCCCCCCCHHHCCCEECCCCCCEEEEEEECCCCCHHHHCCC HFIYDPCFTASWAEAVCIADPWSTEVVRLSLTKDPPFTEDDRFNNNDVPRWALILESGDL CEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCH CTRVSGMRGAVDGQPVSYSCVSGTPVIGFDAEQEKVNLRSASGSISNERVLVAWI HHHHCCCCCCCCCCCCEEEECCCCEEEECCCCHHEEEEECCCCCCCCCEEEEEEC >Mature Secondary Structure TNMKIAIEVGLVALEVVLISIAFLVIPPRTRTNQSRGQRLTKVEAGTLAAVLVIAVLAP CCEEEEEEHHHHHHHHHHHHHHHHEECCCCCCCHHHCCEEEEECHHHHHHHHHHHHHHH IGAVNRFSERQSRLIVHRYTPVDPVSGELRAGLQAESMSGECWTLSLVSNSADAFRCMSG HHHHHHHHHHHHEEEEEECCCCCCCCCHHHCCCEECCCCCCEEEEEEECCCCCHHHHCCC HFIYDPCFTASWAEAVCIADPWSTEVVRLSLTKDPPFTEDDRFNNNDVPRWALILESGDL CEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCH CTRVSGMRGAVDGQPVSYSCVSGTPVIGFDAEQEKVNLRSASGSISNERVLVAWI HHHHCCCCCCCCCCCCEEEECCCCEEEECCCCHHEEEEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA