| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313244
Identifier: 158313244
GI number: 158313244
Start: 1696695
End: 1697351
Strand: Direct
Name: 158313244
Synonym: Franean1_1400
Alternate gene names: NA
Gene position: 1696695-1697351 (Clockwise)
Preceding gene: 158313243
Following gene: 158313253
Centisome position: 18.89
GC content: 60.88
Gene sequence:
>657_bases ATGCCTGGACATGCTGATCCGGTAGCCGCCAGCACAGCAGCGTGGGAACAACACGCACAGAAGCGCATTGCGGCTGGTGA TATCGACGAGCGCCCTGCTGTCCACAGATTCCGCTGGACTCGCACCGGCGTTGGAGACCCGGGGATCGAGATCCTCGGAG ATCTTCAAGGAAAGCGCGTTGTCGAACTCGGCTGTGGCGCGGGCGATAATCTCGCCTATCTGGTCGATCACTGCGGTGCT CGCGGCATCGGGATCGACCCGGCTCCTTCCCAGATCTACCGCGCACGGACCCGATGGCCAAATCCGATCTTCCATTGCAC CGATGCGGTCAGCTATCTTGCCACATGCGGTCCCGTGGATGTCTTCTATAGCGTTTTCGGTGCAGTCGGACGATGCCCGC CGGAGGCCCTGTTCCGCCAGATCCATGAGCGTCTGAAACCCGGCGGACGGCTCGTCTTCTCACTGTTGGATGAGTCTTCG GCGGTGCGTTCATCCGCAGAGCATGAGCCAGGCCTGCGTGGGAGCTACCAGGCAGGCTTGCGTGAGTGGCTGGAGAGACT TCGATATTCCGCGTTCCCGAAATCCGAGGTCTCCTTGGCGGACGAGAGTCTCACTCCGAGCACTCTGATCTTTTCGTGTG CGAGGCCGGGTATTTGA
Upstream 100 bases:
>100_bases TCGCCTGGTACCTCGAACAGGCCACCACCTGGATCAACGATCCAGGTCAGGACGATGTCGTCGCACAGGTAGTCCGCCGT CATCTTCGTGAGGCAACCAC
Downstream 100 bases:
>100_bases GCTCGCCAAGTCTTCATCGGATCAGCCGGGGGTCCGCCCGTGCTCGCTGGCCCAGCCGAAGCTAACGGAAATCCACCTTT TCCATGACCTTCTTTGCCCC
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Xre Family xin-Antitoxin System Antitoxin Component; Peptidase
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MPGHADPVAASTAAWEQHAQKRIAAGDIDERPAVHRFRWTRTGVGDPGIEILGDLQGKRVVELGCGAGDNLAYLVDHCGA RGIGIDPAPSQIYRARTRWPNPIFHCTDAVSYLATCGPVDVFYSVFGAVGRCPPEALFRQIHERLKPGGRLVFSLLDESS AVRSSAEHEPGLRGSYQAGLREWLERLRYSAFPKSEVSLADESLTPSTLIFSCARPGI
Sequences:
>Translated_218_residues MPGHADPVAASTAAWEQHAQKRIAAGDIDERPAVHRFRWTRTGVGDPGIEILGDLQGKRVVELGCGAGDNLAYLVDHCGA RGIGIDPAPSQIYRARTRWPNPIFHCTDAVSYLATCGPVDVFYSVFGAVGRCPPEALFRQIHERLKPGGRLVFSLLDESS AVRSSAEHEPGLRGSYQAGLREWLERLRYSAFPKSEVSLADESLTPSTLIFSCARPGI >Mature_217_residues PGHADPVAASTAAWEQHAQKRIAAGDIDERPAVHRFRWTRTGVGDPGIEILGDLQGKRVVELGCGAGDNLAYLVDHCGAR GIGIDPAPSQIYRARTRWPNPIFHCTDAVSYLATCGPVDVFYSVFGAVGRCPPEALFRQIHERLKPGGRLVFSLLDESSA VRSSAEHEPGLRGSYQAGLREWLERLRYSAFPKSEVSLADESLTPSTLIFSCARPGI
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23709; Mature: 23578
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGHADPVAASTAAWEQHAQKRIAAGDIDERPAVHRFRWTRTGVGDPGIEILGDLQGKRV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCEE VELGCGAGDNLAYLVDHCGARGIGIDPAPSQIYRARTRWPNPIFHCTDAVSYLATCGPVD EEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHH VFYSVFGAVGRCPPEALFRQIHERLKPGGRLVFSLLDESSAVRSSAEHEPGLRGSYQAGL HHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH REWLERLRYSAFPKSEVSLADESLTPSTLIFSCARPGI HHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure PGHADPVAASTAAWEQHAQKRIAAGDIDERPAVHRFRWTRTGVGDPGIEILGDLQGKRV CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCEE VELGCGAGDNLAYLVDHCGARGIGIDPAPSQIYRARTRWPNPIFHCTDAVSYLATCGPVD EEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHH VFYSVFGAVGRCPPEALFRQIHERLKPGGRLVFSLLDESSAVRSSAEHEPGLRGSYQAGL HHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH REWLERLRYSAFPKSEVSLADESLTPSTLIFSCARPGI HHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA