| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313242
Identifier: 158313242
GI number: 158313242
Start: 1694949
End: 1695716
Strand: Direct
Name: 158313242
Synonym: Franean1_1398
Alternate gene names: NA
Gene position: 1694949-1695716 (Clockwise)
Preceding gene: 158313239
Following gene: 158313243
Centisome position: 18.87
GC content: 68.1
Gene sequence:
>768_bases ATGCTCGCCACGAAACCCGAACACCCCGCAGCTTTCTCGGTGGAAATAAGCGAACCATTCACTCCCACCTGGAACCGTAT CCCGGGCATCACGGTGAACGGGACCACGGTCACGGTCGAGCCGGACCGGTACTTCTTCCGTCGCAGTACCGCGCCGGTCT GGATGCTAGTCGACTGGGACCTCGTGACCGAGCGCCTGCTGTCGGAGGACGAGACCGAGAAGGCCGCCGTCGAACAGCAG ACCCTGGAGTTCGTGCGTACCTACGGCCAGCGGACGTCCGACCCGGCCGACGTGCTGCGCACCGCCGACCGGGTCTACCA CCACCTGTTCTCCGCTGAGCAGATGGACGACCCCGACCTGTCCGACGTGACCGACACCGAACTCCGCATCCTGAGGGAGT CCGCGACCCTCGCGGCGCTTAACCGGGTCGAGCTGTCCGGGGAGATCTCCGACATCGGCCCGGCGTGGTTCTTCCCGGCT ACCGCCAGGGTCGTCTACGACCTGGACGCGGACGCCGCCGAGCGGGTCGACGACCTGTACCACGGCGGCTTCTTCAACGA GTACCGCCGGGTGGAGGCGGTCAGGGCACACGCGGCGCTCGGCGGCCGTCTCGTCCACGGCTGCCAGTCGGCGCCGAACA TGTCCGGCGGTGCCGTCGTCCCGTTCGGTGTCGACCTCGACAGGTTCCGGACCGACCTGTCCGCCCTCAAGCGGGGCTGG ATCACGTCGATCCTCGACCTCGTCCCCGCTCGGGCGGTCACGGCCTGA
Upstream 100 bases:
>100_bases GACACGACCTCCCCGATTTACCCGCCGGACCGCACGCCCGACGGGGAAGGCTCGTGAATCGATACCGGAATCAACGGAGA ACCCGAAAGGACAGTGAGCC
Downstream 100 bases:
>100_bases CCTCCCTGCCGTTCCCGCCGGCCGGTGACGTGGCACTGCCGCCAGCGTCACCGGCCGGCGTCATGTGATCACGGAGACTC TTCTGATGGACGACACAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLATKPEHPAAFSVEISEPFTPTWNRIPGITVNGTTVTVEPDRYFFRRSTAPVWMLVDWDLVTERLLSEDETEKAAVEQQ TLEFVRTYGQRTSDPADVLRTADRVYHHLFSAEQMDDPDLSDVTDTELRILRESATLAALNRVELSGEISDIGPAWFFPA TARVVYDLDADAAERVDDLYHGGFFNEYRRVEAVRAHAALGGRLVHGCQSAPNMSGGAVVPFGVDLDRFRTDLSALKRGW ITSILDLVPARAVTA
Sequences:
>Translated_255_residues MLATKPEHPAAFSVEISEPFTPTWNRIPGITVNGTTVTVEPDRYFFRRSTAPVWMLVDWDLVTERLLSEDETEKAAVEQQ TLEFVRTYGQRTSDPADVLRTADRVYHHLFSAEQMDDPDLSDVTDTELRILRESATLAALNRVELSGEISDIGPAWFFPA TARVVYDLDADAAERVDDLYHGGFFNEYRRVEAVRAHAALGGRLVHGCQSAPNMSGGAVVPFGVDLDRFRTDLSALKRGW ITSILDLVPARAVTA >Mature_255_residues MLATKPEHPAAFSVEISEPFTPTWNRIPGITVNGTTVTVEPDRYFFRRSTAPVWMLVDWDLVTERLLSEDETEKAAVEQQ TLEFVRTYGQRTSDPADVLRTADRVYHHLFSAEQMDDPDLSDVTDTELRILRESATLAALNRVELSGEISDIGPAWFFPA TARVVYDLDADAAERVDDLYHGGFFNEYRRVEAVRAHAALGGRLVHGCQSAPNMSGGAVVPFGVDLDRFRTDLSALKRGW ITSILDLVPARAVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28411; Mature: 28411
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATKPEHPAAFSVEISEPFTPTWNRIPGITVNGTTVTVEPDRYFFRRSTAPVWMLVDWD CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCEEEEECCCHHEEECCCCCEEEEEEHH LVTERLLSEDETEKAAVEQQTLEFVRTYGQRTSDPADVLRTADRVYHHLFSAEQMDDPDL HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC SDVTDTELRILRESATLAALNRVELSGEISDIGPAWFFPATARVVYDLDADAAERVDDLY CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH HGGFFNEYRRVEAVRAHAALGGRLVHGCQSAPNMSGGAVVPFGVDLDRFRTDLSALKRGW CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH ITSILDLVPARAVTA HHHHHHHHHHHHCCC >Mature Secondary Structure MLATKPEHPAAFSVEISEPFTPTWNRIPGITVNGTTVTVEPDRYFFRRSTAPVWMLVDWD CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCEEEEECCCHHEEECCCCCEEEEEEHH LVTERLLSEDETEKAAVEQQTLEFVRTYGQRTSDPADVLRTADRVYHHLFSAEQMDDPDL HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC SDVTDTELRILRESATLAALNRVELSGEISDIGPAWFFPATARVVYDLDADAAERVDDLY CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH HGGFFNEYRRVEAVRAHAALGGRLVHGCQSAPNMSGGAVVPFGVDLDRFRTDLSALKRGW CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH ITSILDLVPARAVTA HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA