| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313210
Identifier: 158313210
GI number: 158313210
Start: 1645380
End: 1645829
Strand: Direct
Name: 158313210
Synonym: Franean1_1364
Alternate gene names: NA
Gene position: 1645380-1645829 (Clockwise)
Preceding gene: 158313209
Following gene: 158313211
Centisome position: 18.32
GC content: 73.78
Gene sequence:
>450_bases ATGAACATCACCTTGCCGCGGCCGTCCACGAGTTCGGACGACAACCCCGCTGGCGGCGACCGGACTGACGGTGACCGCGG TACGGGTGCGGCCTCGGACGCCGGGCATGTCGTCGCGTTCGTCGCCGTCGTCGGCGCCGTGCTGGTACTGCTCGTGCTCC TGCTCACGCTGGGGGTGCGGTGGCTTGCCGCCGAAGCCGCCACCGCCGCGAGCCAGCGCGCCCTGGAGATCGCCCAGGCC CCCGACGGGACGGACGGCGAGGCGCGCGCCGTCGCCACCGGGCTCGCGACCTCGGTCAGCCTGATCGCCGGCGTCGACGT CCTCGTCACCCGCGCCGACGACTTCGTGACGGTCACCGTGACGGCCCACGACCGGCTCGGCGGCACCGTCAGCCGCTCCG CCACCGGCCCGGTGATCCGCTTCGTCCCCCAAACGCGACCTTCCCCATGA
Upstream 100 bases:
>100_bases TTCATTCTGCGTGAGCGTGCAACGGAGATCGCCCGCAACGTCTGCACATCCACCGACCCGACGGAATGCGGGCAGTAGAC GGCAGCAGGCAGATACCGCC
Downstream 100 bases:
>100_bases TCCGCCGTCCGGTACCGTTCCGCTCCCGCCGTCACCCGCGGCCTCGCGCCGAGCGGGATGGCGGTTCGTTCGCCGTCGAG TTCGCCGCCGGCTTCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNITLPRPSTSSDDNPAGGDRTDGDRGTGAASDAGHVVAFVAVVGAVLVLLVLLLTLGVRWLAAEAATAASQRALEIAQA PDGTDGEARAVATGLATSVSLIAGVDVLVTRADDFVTVTVTAHDRLGGTVSRSATGPVIRFVPQTRPSP
Sequences:
>Translated_149_residues MNITLPRPSTSSDDNPAGGDRTDGDRGTGAASDAGHVVAFVAVVGAVLVLLVLLLTLGVRWLAAEAATAASQRALEIAQA PDGTDGEARAVATGLATSVSLIAGVDVLVTRADDFVTVTVTAHDRLGGTVSRSATGPVIRFVPQTRPSP >Mature_149_residues MNITLPRPSTSSDDNPAGGDRTDGDRGTGAASDAGHVVAFVAVVGAVLVLLVLLLTLGVRWLAAEAATAASQRALEIAQA PDGTDGEARAVATGLATSVSLIAGVDVLVTRADDFVTVTVTAHDRLGGTVSRSATGPVIRFVPQTRPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14997; Mature: 14997
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITLPRPSTSSDDNPAGGDRTDGDRGTGAASDAGHVVAFVAVVGAVLVLLVLLLTLGVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WLAAEAATAASQRALEIAQAPDGTDGEARAVATGLATSVSLIAGVDVLVTRADDFVTVTV HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEE TAHDRLGGTVSRSATGPVIRFVPQTRPSP EECCCCCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure MNITLPRPSTSSDDNPAGGDRTDGDRGTGAASDAGHVVAFVAVVGAVLVLLVLLLTLGVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WLAAEAATAASQRALEIAQAPDGTDGEARAVATGLATSVSLIAGVDVLVTRADDFVTVTV HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEE TAHDRLGGTVSRSATGPVIRFVPQTRPSP EECCCCCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA