| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313203
Identifier: 158313203
GI number: 158313203
Start: 1639496
End: 1640392
Strand: Direct
Name: 158313203
Synonym: Franean1_1357
Alternate gene names: NA
Gene position: 1639496-1640392 (Clockwise)
Preceding gene: 158313202
Following gene: 158313204
Centisome position: 18.25
GC content: 69.9
Gene sequence:
>897_bases ATGGACGGGCGAGAACCGGTGCCCGCCGCAATAAGCCGCCGGCTCCGGAGCCGCCGGCTCGGGCATCGCCATCTCGTCGT GGCCGCCTGCGTCGCCGTCTGGCTGTTCACGGGGGTGGTACCGGCCTGGTCCAGCACGGGCCGCGGAACGGAAAGGCATG CCGAGGCCATGGGTAACTCCGATCCCGCGCTGGGGCGGATCGAGGCCATGGCCGGAGCGACGACCACCCCGCCGGACACG GGCGGCGAAGGCGGCAACGGAGCACCGGAGCCGTGCCAGTGGTATCCGGCAGACCTTTACCTCTACCTGCAAGCGGTACC AGGCCCGACGGAGCGCACCGCGCCGGCCGGGACGCGGGAGGTCCTCTACGCGCGCGTCTGCGACCCCGCGAACGTCACCT ACCACTGGTTGCGCGACATCGTTGATCCACAACAGGCGGTCGTGATGGCTATGGCGATCGCGCAGGAACGGATCCCTGCC CCGGCGGCGGTGTTCGCTCCCGATATCGAACGCGGAGCTTTCGTGAAGGCCCCGATGCGCTTCGGGATCACGAACGGACG CCCGGTCTCGGCCAGCGCATCCGTCCCCGGAGTGACAGCAACGGTCACAGCAACACCACGGCGACTGGAATTCACCCCCG GCGACGGTTCGCCTCCTGCTGGCTGTGATGTCGCCGTCCTCGGCGCAGACCAGCCGGCCGCGGCCTGCACATACACCTAC CGGGACTCCTCGATTGTCGCCCCGAACGGCGAGTACTGGCCGGCGCAGCTTCGCGTCGAGTGGGTGGTGGGGTGGACCGC CACGACGGGAGCGGGCGGTGATCTCCCGACGGTCACGACGACAGCGGACTACGCGGTGCCGGTCCGGGAGATCCAGGCGC TGGAGCACGCGAACTGA
Upstream 100 bases:
>100_bases AGATCGTCGTCAGCGACGCGGTCGAAAGCACCCGTACCGCATGGATGTGGGTCTTTGACCGAGGCACCTGGCGGATCTCC GAGTCGGCGACCCTCGAGAC
Downstream 100 bases:
>100_bases TCTGGTCCCGCCTACCGGTGGCTGCTCTCACCGGAAGCCGGGCCGCGAAGAGATGGGTGATACGCGATGGCGACAACGGT CGATGCCCCCAGACCGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MDGREPVPAAISRRLRSRRLGHRHLVVAACVAVWLFTGVVPAWSSTGRGTERHAEAMGNSDPALGRIEAMAGATTTPPDT GGEGGNGAPEPCQWYPADLYLYLQAVPGPTERTAPAGTREVLYARVCDPANVTYHWLRDIVDPQQAVVMAMAIAQERIPA PAAVFAPDIERGAFVKAPMRFGITNGRPVSASASVPGVTATVTATPRRLEFTPGDGSPPAGCDVAVLGADQPAAACTYTY RDSSIVAPNGEYWPAQLRVEWVVGWTATTGAGGDLPTVTTTADYAVPVREIQALEHAN
Sequences:
>Translated_298_residues MDGREPVPAAISRRLRSRRLGHRHLVVAACVAVWLFTGVVPAWSSTGRGTERHAEAMGNSDPALGRIEAMAGATTTPPDT GGEGGNGAPEPCQWYPADLYLYLQAVPGPTERTAPAGTREVLYARVCDPANVTYHWLRDIVDPQQAVVMAMAIAQERIPA PAAVFAPDIERGAFVKAPMRFGITNGRPVSASASVPGVTATVTATPRRLEFTPGDGSPPAGCDVAVLGADQPAAACTYTY RDSSIVAPNGEYWPAQLRVEWVVGWTATTGAGGDLPTVTTTADYAVPVREIQALEHAN >Mature_298_residues MDGREPVPAAISRRLRSRRLGHRHLVVAACVAVWLFTGVVPAWSSTGRGTERHAEAMGNSDPALGRIEAMAGATTTPPDT GGEGGNGAPEPCQWYPADLYLYLQAVPGPTERTAPAGTREVLYARVCDPANVTYHWLRDIVDPQQAVVMAMAIAQERIPA PAAVFAPDIERGAFVKAPMRFGITNGRPVSASASVPGVTATVTATPRRLEFTPGDGSPPAGCDVAVLGADQPAAACTYTY RDSSIVAPNGEYWPAQLRVEWVVGWTATTGAGGDLPTVTTTADYAVPVREIQALEHAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31425; Mature: 31425
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGREPVPAAISRRLRSRRLGHRHLVVAACVAVWLFTGVVPAWSSTGRGTERHAEAMGNS CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC DPALGRIEAMAGATTTPPDTGGEGGNGAPEPCQWYPADLYLYLQAVPGPTERTAPAGTRE CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHH VLYARVCDPANVTYHWLRDIVDPQQAVVMAMAIAQERIPAPAAVFAPDIERGAFVKAPMR EEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEECCCE FGITNGRPVSASASVPGVTATVTATPRRLEFTPGDGSPPAGCDVAVLGADQPAAACTYTY ECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEE RDSSIVAPNGEYWPAQLRVEWVVGWTATTGAGGDLPTVTTTADYAVPVREIQALEHAN CCCEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHCCC >Mature Secondary Structure MDGREPVPAAISRRLRSRRLGHRHLVVAACVAVWLFTGVVPAWSSTGRGTERHAEAMGNS CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC DPALGRIEAMAGATTTPPDTGGEGGNGAPEPCQWYPADLYLYLQAVPGPTERTAPAGTRE CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHH VLYARVCDPANVTYHWLRDIVDPQQAVVMAMAIAQERIPAPAAVFAPDIERGAFVKAPMR EEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEECCCE FGITNGRPVSASASVPGVTATVTATPRRLEFTPGDGSPPAGCDVAVLGADQPAAACTYTY ECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEE RDSSIVAPNGEYWPAQLRVEWVVGWTATTGAGGDLPTVTTTADYAVPVREIQALEHAN CCCEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA