Click here to switch to the map view.

The map label for this gene is 158313198

Identifier: 158313198

GI number: 158313198

Start: 1629659

End: 1631179

Strand: Direct

Name: 158313198

Synonym: Franean1_1352

Alternate gene names: NA

Gene position: 1629659-1631179 (Clockwise)

Preceding gene: 158313197

Following gene: 158313201

Centisome position: 18.14

GC content: 70.94

Gene sequence:

>1521_bases
GTGAGCCGACCCCGGCTACCAGCATCCGCCCCGTCCTATCCGAGACCCCGAGTAGAACCGGCCCCTACCCAGGCAGCCAA
ACACCGACCAGGACCCGGCCGGACCCAGACGCATCCCACGATCACCTACACCCAGCCCCTCCACCGGGCCCGGCCGGAGG
CTCAACCTGACGCACGGGCCGGACGACACCGACCGCCCAGTACGACACGCTCACGGCACCGCCGCCGCAAACCGCGACCG
GCCGCCCACCGCAAACACCGCGCCGGCCTGATCCGCACGGCGATGCTGCCAGCAGCCATCGCGACAAGCCTGCTGCTGTT
CTGCGCCGCCGCCGCACCCCGCGACACCGCCAACCAGCTCGGCCCCGCCCCCGTGCACCCCGGACAGTGGACCATGCCCG
AACTCGTCCCCGGCGGATCCGGGACCGGGACCGGGAACGTCGACCCGTCCACCCTCACCACCCAGACCCTCGCAGCCACC
GCCACCTCGCCCGGCACCAACGCCAACAGCACCGCGATCACCCTCACCGCCGCCGACAAAGGCATCCCCGCCCGCGTCCT
GACCGCCTACCGACACGCAGCCGACCAGCTCACCCACGACAAACCCGGCTGCCACCTGCCCTGGGAACTCCTCGCCGCCA
TCGGCAAAGTCGAATCCGGCCACGCCACCGGCCACCCCATCACCGACGACGGCACCATCACCCGCCCCATCCTCGGCCCA
CCCCTCAACGGCACCGCCGGCGTCGCCCTCATCCACGACACCGACAACGGAACCCTCGACCACGACACCACCTACGACCG
GGCCGTCGGCCCCATGCAGTTCATCCCCACCACCTGGCGCACCTCCGGCCATGACGGCAACAACGACGGACGCAACGACC
CCCACAACATCGACGACGCCACCGTCGCCGCCGGCCACTACCTCTGCGCCCACGGCCGCGACCTCACCAACCCCGACCAG
CTCCGCGCCGCGATCCTCGCCTACAACCCCTCCGACACCTACGTCCGCACCGTCCTCACCTGGATGAACGGCTACCGACA
GACCGGCGCCACCGCCCTGCCCGGCAACCCCGCCCCACCGACACCCCCAACACCCAACCACCCAGCCGTTCCCACGCCGC
CCCTCCATCCTTCAGCCCCAGCCAGTCCCGAGAGCCCGCACATACCCGAACCGACCACGCCACCCACCCCCAAGACCATC
CCCGGCATCACGATCATTCCGCTGACCCCAAGAACACCGAACCCAACGCCCTCAACTCCGCCGACTATGACGCAGCCGAA
CAGCCCCGAGACAACCAACCCACCGAGCACACCCGAGACCCCACCCACAACGGCGCCGCCGCCGACCCCGTCCACTGTGC
CGACGATCCCCGACCCGTCTGGACCAGAGGCCGAGGAAACACCCCGCGAGTCACCGAACACCGCCCTGACCGCCGGAAAC
ACCGTTCCGACCGGCTCCCTGCCCGAGGCGCCAACCACCCCCGCACCCGCAGCCCCGGCTCCGGCATCGGAACAGCGTTG
A

Upstream 100 bases:

>100_bases
TGGCCCGCCAGCGCCACGAACGCCACCGCCGACTGAGCACGCTCGCGCGACCGCCGGCTGAGCAGACTCCAGGACTGAGC
ACACTCGAAGGAGCGCGCCG

Downstream 100 bases:

>100_bases
CAGCTCGCCGTGGCCGGGACGGACACCGGCGGGCGGCAGCCAGCCCGCTGCCGGGCGATCGGCCCTTCGTGGACGGCGAT
CTACTTACGCCTGCAGACCT

Product: membrane-bound lytic murein transglycosylase B-like protein

Products: NA

Alternate protein names: Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Membrane-Bound Lytic Murein Transglycosylase B; Lipoprotein LpqU; Lytic Transglycosylase Catalytic; NLP/P60-Family Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B-Like; Transglycosylase; LOW QUALITY PROTEIN Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase; Cell Wall-Associated Hydrolase Invasion-Associated Protein; LpqU Protein; Peptidase; Membrane-Bound Lytic Murein Transglycosylase B Protein; NLP/P60 Protein

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MSRPRLPASAPSYPRPRVEPAPTQAAKHRPGPGRTQTHPTITYTQPLHRARPEAQPDARAGRHRPPSTTRSRHRRRKPRP
AAHRKHRAGLIRTAMLPAAIATSLLLFCAAAAPRDTANQLGPAPVHPGQWTMPELVPGGSGTGTGNVDPSTLTTQTLAAT
ATSPGTNANSTAITLTAADKGIPARVLTAYRHAADQLTHDKPGCHLPWELLAAIGKVESGHATGHPITDDGTITRPILGP
PLNGTAGVALIHDTDNGTLDHDTTYDRAVGPMQFIPTTWRTSGHDGNNDGRNDPHNIDDATVAAGHYLCAHGRDLTNPDQ
LRAAILAYNPSDTYVRTVLTWMNGYRQTGATALPGNPAPPTPPTPNHPAVPTPPLHPSAPASPESPHIPEPTTPPTPKTI
PGITIIPLTPRTPNPTPSTPPTMTQPNSPETTNPPSTPETPPTTAPPPTPSTVPTIPDPSGPEAEETPRESPNTALTAGN
TVPTGSLPEAPTTPAPAAPAPASEQR

Sequences:

>Translated_506_residues
MSRPRLPASAPSYPRPRVEPAPTQAAKHRPGPGRTQTHPTITYTQPLHRARPEAQPDARAGRHRPPSTTRSRHRRRKPRP
AAHRKHRAGLIRTAMLPAAIATSLLLFCAAAAPRDTANQLGPAPVHPGQWTMPELVPGGSGTGTGNVDPSTLTTQTLAAT
ATSPGTNANSTAITLTAADKGIPARVLTAYRHAADQLTHDKPGCHLPWELLAAIGKVESGHATGHPITDDGTITRPILGP
PLNGTAGVALIHDTDNGTLDHDTTYDRAVGPMQFIPTTWRTSGHDGNNDGRNDPHNIDDATVAAGHYLCAHGRDLTNPDQ
LRAAILAYNPSDTYVRTVLTWMNGYRQTGATALPGNPAPPTPPTPNHPAVPTPPLHPSAPASPESPHIPEPTTPPTPKTI
PGITIIPLTPRTPNPTPSTPPTMTQPNSPETTNPPSTPETPPTTAPPPTPSTVPTIPDPSGPEAEETPRESPNTALTAGN
TVPTGSLPEAPTTPAPAAPAPASEQR
>Mature_505_residues
SRPRLPASAPSYPRPRVEPAPTQAAKHRPGPGRTQTHPTITYTQPLHRARPEAQPDARAGRHRPPSTTRSRHRRRKPRPA
AHRKHRAGLIRTAMLPAAIATSLLLFCAAAAPRDTANQLGPAPVHPGQWTMPELVPGGSGTGTGNVDPSTLTTQTLAATA
TSPGTNANSTAITLTAADKGIPARVLTAYRHAADQLTHDKPGCHLPWELLAAIGKVESGHATGHPITDDGTITRPILGPP
LNGTAGVALIHDTDNGTLDHDTTYDRAVGPMQFIPTTWRTSGHDGNNDGRNDPHNIDDATVAAGHYLCAHGRDLTNPDQL
RAAILAYNPSDTYVRTVLTWMNGYRQTGATALPGNPAPPTPPTPNHPAVPTPPLHPSAPASPESPHIPEPTTPPTPKTIP
GITIIPLTPRTPNPTPSTPPTMTQPNSPETTNPPSTPETPPTTAPPPTPSTVPTIPDPSGPEAEETPRESPNTALTAGNT
VPTGSLPEAPTTPAPAAPAPASEQR

Specific function: Unknown

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52963; Mature: 52832

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPRLPASAPSYPRPRVEPAPTQAAKHRPGPGRTQTHPTITYTQPLHRARPEAQPDARA
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCHHHCCCCCCCCHHC
GRHRPPSTTRSRHRRRKPRPAAHRKHRAGLIRTAMLPAAIATSLLLFCAAAAPRDTANQL
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
GPAPVHPGQWTMPELVPGGSGTGTGNVDPSTLTTQTLAATATSPGTNANSTAITLTAADK
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEEEEECCC
GIPARVLTAYRHAADQLTHDKPGCHLPWELLAAIGKVESGHATGHPITDDGTITRPILGP
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCC
PLNGTAGVALIHDTDNGTLDHDTTYDRAVGPMQFIPTTWRTSGHDGNNDGRNDPHNIDDA
CCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
TVAAGHYLCAHGRDLTNPDQLRAAILAYNPSDTYVRTVLTWMNGYRQTGATALPGNPAPP
HHHHCCEEEECCCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCEECCCCCCCC
TPPTPNHPAVPTPPLHPSAPASPESPHIPEPTTPPTPKTIPGITIIPLTPRTPNPTPSTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
PTMTQPNSPETTNPPSTPETPPTTAPPPTPSTVPTIPDPSGPEAEETPRESPNTALTAGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCC
TVPTGSLPEAPTTPAPAAPAPASEQR
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRPRLPASAPSYPRPRVEPAPTQAAKHRPGPGRTQTHPTITYTQPLHRARPEAQPDARA
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCHHHCCCCCCCCHHC
GRHRPPSTTRSRHRRRKPRPAAHRKHRAGLIRTAMLPAAIATSLLLFCAAAAPRDTANQL
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
GPAPVHPGQWTMPELVPGGSGTGTGNVDPSTLTTQTLAATATSPGTNANSTAITLTAADK
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEEEEECCC
GIPARVLTAYRHAADQLTHDKPGCHLPWELLAAIGKVESGHATGHPITDDGTITRPILGP
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCC
PLNGTAGVALIHDTDNGTLDHDTTYDRAVGPMQFIPTTWRTSGHDGNNDGRNDPHNIDDA
CCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
TVAAGHYLCAHGRDLTNPDQLRAAILAYNPSDTYVRTVLTWMNGYRQTGATALPGNPAPP
HHHHCCEEEECCCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCEECCCCCCCC
TPPTPNHPAVPTPPLHPSAPASPESPHIPEPTTPPTPKTIPGITIIPLTPRTPNPTPSTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
PTMTQPNSPETTNPPSTPETPPTTAPPPTPSTVPTIPDPSGPEAEETPRESPNTALTAGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCC
TVPTGSLPEAPTTPAPAAPAPASEQR
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA