| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313192
Identifier: 158313192
GI number: 158313192
Start: 1615144
End: 1616529
Strand: Direct
Name: 158313192
Synonym: Franean1_1342
Alternate gene names: NA
Gene position: 1615144-1616529 (Clockwise)
Preceding gene: 158313191
Following gene: 158313197
Centisome position: 17.98
GC content: 71.36
Gene sequence:
>1386_bases GTGATCCGAGGCGCCCGTCCTCGCCACGGCCGAGACTCAGGGCGGGCGCCGGTGCCCGCCGGCGGCCCGTTGTTGCCCCC GCAGTTGCGGGACCGTCGACTCGCACTGTCCCGCGACCTGGCCACCACCGCCCATCTCTGCTCGGCCTATCCGTTCACCG TCGAAGCTGGCACCGGCGTCGCCGGCGCCTTCCTGGGCGCCAACCGCCTCGCCGGCGGCGGGTTCTTCTTCGACCTGCAC GACGCCTACGCCGACGGCCTGCTCCAAGGCCCCAACATGGTCATCTGCGGCGCTGGCGCCTACGGCAAGTCCGCCATCGC CAAGACGTACGTCTACCGGTCCACCGCCCTCGCCCCGACCCGCTTCGTCGCCGTCATCGACCCGAAAGGGGAGTGGACGG CCCTGGCCCGCGCGCTCGGCTGGTCCGCGTTGAGGCTGCGACCCGGCGGGTCACTGATCGTCAACCCGTTCGACCGCGGG CCCGCCCAGCACACGCTCGCTGACACCGACCTGCTCGCGCAGCGGGTGACGGTCGCGACCACCCTGTTCGCGATCGCGCT CACCAAGGCCGAGCTCGCCGCCGGCGAGCAGCGTCTCCTCCACGAAGCCCTGCGCCATCTCACCGCCGCCACCGCTCCGG CCGTGAGCCCGACCCTCACCGACCTTCAGCGCCTGCTGGCCGACCCGCCCGCCGCCCTGGCGACCGCGCTGGACACCACC CCCGCCGATCTCGCGGAACGCCGCCGCCCACTGCTCGACGCCTGCGCGATGCTCGTCGAGCACGACCTGCGCGGCATCTG TGACACCGCCACCAGCGTCGACCTCTCCTGGACCGACGCCCCCGGTCTCGTGCTCGACCTGTCAGCCCTGCTCACCCGCC GGCGCACCCTCAAACTCGTCCTCGCCGCGGCAGCCGGCTGGCTGCAGGGCGTCATGTACCAGCAGACCGACCGCCGCAAG CTCGTCATCCTCGACGAAGGCTGGATTGCCCTCGAGGACCTTGCCATCACCCGCTTCCTGCAGGACCAGTGGCGTCTCGG CCGGCAGTGGGGAACCGCGAACATCCTCATCACCCATGCCCTGGCCGACCTGCGTTCCCAGGTCGACGACGGCGCCGCCG CAGGCAAGATCGCCGAAGGGCTGCTCACCACCACCTCGGCCCGAGTTTTCCTGCACCAGAACCCCGAGCAGACCCGCAGG CTCCTGGCCGACCTCGGACTCACCAGCACCGAGACCAACCTGCTCCGGCTCCTCGACCCGCTCCAGGCACTGTGGAAGAT CGGAAGCCGAGCAGCTGTCGTCGACCACGTCGTCGCCCCCTGGGAATGGGCTGGGTTCGCTGGCACCGACGACGCGATGA CCGCCGTCGCACCAACGGCGTACTGA
Upstream 100 bases:
>100_bases CCCACGCCCAGCACCTCCCCGGAACCCGCCCGGCCGCCCTGCCGCCTATAGCCGGCCACCGGGACCCCGGCACACCTCCA CCGCCCCTCGCGGAGTTGCC
Downstream 100 bases:
>100_bases CTCCATCGCGAAGCTTCTGGGTGTCAGCCTGCCGACGTCGTCCACCCACATCTCCGAACTCGGCGGCCGGACTGCGTCTG CGGCCTCCGGCCGCGGAGCC
Product: ATP-binding protein
Products: NA
Alternate protein names: Type IV Secretory Pathway VirB4 Components-Like Protein; Type IV Secretory Pathway VirB4 Component-Like Protein
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGVAGAFLGANRLAGGGFFFDLH DAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPTRFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRG PAQHTLADTDLLAQRVTVATTLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLVLAAAAGWLQGVMYQQTDRRK LVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHALADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRR LLADLGLTSTETNLLRLLDPLQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY
Sequences:
>Translated_461_residues MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGVAGAFLGANRLAGGGFFFDLH DAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPTRFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRG PAQHTLADTDLLAQRVTVATTLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLVLAAAAGWLQGVMYQQTDRRK LVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHALADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRR LLADLGLTSTETNLLRLLDPLQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY >Mature_461_residues MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGVAGAFLGANRLAGGGFFFDLH DAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPTRFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRG PAQHTLADTDLLAQRVTVATTLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLVLAAAAGWLQGVMYQQTDRRK LVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHALADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRR LLADLGLTSTETNLLRLLDPLQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49330; Mature: 49330
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC AGAFLGANRLAGGGFFFDLHDAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPT HHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE RFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRGPAQHTLADTDLLAQRVTVAT EEEEEECCCCHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH TLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLV HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH LAAAAGWLQGVMYQQTDRRKLVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHA HHHHHHHHHHHHHCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRRLLADLGLTSTETNLLRLLDP HHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHH LQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC AGAFLGANRLAGGGFFFDLHDAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPT HHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE RFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRGPAQHTLADTDLLAQRVTVAT EEEEEECCCCHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH TLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLV HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH LAAAAGWLQGVMYQQTDRRKLVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHA HHHHHHHHHHHHHCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRRLLADLGLTSTETNLLRLLDP HHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHH LQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA