The gene/protein map for NC_009921 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313178

Identifier: 158313178

GI number: 158313178

Start: 1597864

End: 1598733

Strand: Direct

Name: 158313178

Synonym: Franean1_1328

Alternate gene names: NA

Gene position: 1597864-1598733 (Clockwise)

Preceding gene: 158313165

Following gene: 158313179

Centisome position: 17.79

GC content: 68.51

Gene sequence:

>870_bases
GTGGCGACTCAGCGGCAGGCACCACCGACCGTGCGCTCCCGCCGGCTGGCCTTCGAGCTGCGCCGACTACGGGACGAGGC
TGGCCTGACCCGTGATCAGGTCTCCGAGCAGACCGGGATCAATCCCGCGACGCTGTATCGGCACGAGACCGCGACGGCCC
GCTCCCGCCCGCAGCGCCGGACGATGATCGCGTTGCTGAACCTCTACGGCGCCAGCGAGCAGCAACGCGCCGACCTGCTG
GCGCTGTCCCGTGAGACCGACGTCCAAGGCTGGCTGCGGCCGTACCACGCGGAGCTGCCCGAGCACTACACCGCCTACAT
CAGCTTCGAGGTCGAAGCGCGCACGGTGCGCAACTACGAATCGCTGTTCATCCCCGGACTGCTCCAGACCGAGGACTACG
CCCGCGCCGTCATCCGCGGGAACCTGCCGATGGCTAGCGAAAAGGAGGTCGCCACCCGTGTCCAGGCCAGGATGGAACGC
CAGGCCCTGCTGGCCGGCACCTCCCCGCTGCAGCTATGGGCGATCATCGACGAGGCCGCGTTGCACCGCGAGGTCGGCGG
ACCGGACGTCATGCGGGCCCAGCTCCACCGACTGATCGACGCGGCCCGGGAACCGCACGTCACCATCCAGCTCATCCCCT
ACACCGCTGGCGCGCACGCGGGCATGCAGGGGTCGTTCATCATCCTCGACTTCCCGAACCCCGCCGACCCCACGATCATC
TACATTGACAGCATGGCCGGCGACCTGTTCCTCGAAGCCGAGGCCGACATCCGCCGGTATAGCCTGCTCTTCGACAACCT
GCGCGCGGTCGCCCTCAGCCCCGACGCCTCAACCGCCCTGATCGCCACCCTGATAGCACACGCACAGTGA

Upstream 100 bases:

>100_bases
ATGCAAGGTATGCATAGGCAATGGTTGCGGATTAGTGAGGGTGTCGATCCTGGTGTGGACCCTGGTCCGGGCACCCGGAT
GGACGGGAGAGGATCAGGCA

Downstream 100 bases:

>100_bases
GAGGAGGTGTCTACGGTGCACCAGGTAGACCTTTCCCGGGCCGTCTGGCGGAAGAGCGCGCTCAGTAGCGGCAACGGCGC
CTGCGTCGAGGTGGCGTTCC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Xre Family xin-Antitoxin System Antitoxin Component; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein; Helix-Turn-Helix Protein

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MATQRQAPPTVRSRRLAFELRRLRDEAGLTRDQVSEQTGINPATLYRHETATARSRPQRRTMIALLNLYGASEQQRADLL
ALSRETDVQGWLRPYHAELPEHYTAYISFEVEARTVRNYESLFIPGLLQTEDYARAVIRGNLPMASEKEVATRVQARMER
QALLAGTSPLQLWAIIDEAALHREVGGPDVMRAQLHRLIDAAREPHVTIQLIPYTAGAHAGMQGSFIILDFPNPADPTII
YIDSMAGDLFLEAEADIRRYSLLFDNLRAVALSPDASTALIATLIAHAQ

Sequences:

>Translated_289_residues
MATQRQAPPTVRSRRLAFELRRLRDEAGLTRDQVSEQTGINPATLYRHETATARSRPQRRTMIALLNLYGASEQQRADLL
ALSRETDVQGWLRPYHAELPEHYTAYISFEVEARTVRNYESLFIPGLLQTEDYARAVIRGNLPMASEKEVATRVQARMER
QALLAGTSPLQLWAIIDEAALHREVGGPDVMRAQLHRLIDAAREPHVTIQLIPYTAGAHAGMQGSFIILDFPNPADPTII
YIDSMAGDLFLEAEADIRRYSLLFDNLRAVALSPDASTALIATLIAHAQ
>Mature_288_residues
ATQRQAPPTVRSRRLAFELRRLRDEAGLTRDQVSEQTGINPATLYRHETATARSRPQRRTMIALLNLYGASEQQRADLLA
LSRETDVQGWLRPYHAELPEHYTAYISFEVEARTVRNYESLFIPGLLQTEDYARAVIRGNLPMASEKEVATRVQARMERQ
ALLAGTSPLQLWAIIDEAALHREVGGPDVMRAQLHRLIDAAREPHVTIQLIPYTAGAHAGMQGSFIILDFPNPADPTIIY
IDSMAGDLFLEAEADIRRYSLLFDNLRAVALSPDASTALIATLIAHAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32349; Mature: 32218

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQRQAPPTVRSRRLAFELRRLRDEAGLTRDQVSEQTGINPATLYRHETATARSRPQRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHEEECCHHHHHCCCHHH
TMIALLNLYGASEQQRADLLALSRETDVQGWLRPYHAELPEHYTAYISFEVEARTVRNYE
HHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHCHH
SLFIPGLLQTEDYARAVIRGNLPMASEKEVATRVQARMERQALLAGTSPLQLWAIIDEAA
HHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LHREVGGPDVMRAQLHRLIDAAREPHVTIQLIPYTAGAHAGMQGSFIILDFPNPADPTII
HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEE
YIDSMAGDLFLEAEADIRRYSLLFDNLRAVALSPDASTALIATLIAHAQ
EEECCCCCEEEECCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ATQRQAPPTVRSRRLAFELRRLRDEAGLTRDQVSEQTGINPATLYRHETATARSRPQRR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHEEECCHHHHHCCCHHH
TMIALLNLYGASEQQRADLLALSRETDVQGWLRPYHAELPEHYTAYISFEVEARTVRNYE
HHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHCHH
SLFIPGLLQTEDYARAVIRGNLPMASEKEVATRVQARMERQALLAGTSPLQLWAIIDEAA
HHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LHREVGGPDVMRAQLHRLIDAAREPHVTIQLIPYTAGAHAGMQGSFIILDFPNPADPTII
HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEE
YIDSMAGDLFLEAEADIRRYSLLFDNLRAVALSPDASTALIATLIAHAQ
EEECCCCCEEEECCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA