| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313164
Identifier: 158313164
GI number: 158313164
Start: 1585817
End: 1586176
Strand: Direct
Name: 158313164
Synonym: Franean1_1313
Alternate gene names: NA
Gene position: 1585817-1586176 (Clockwise)
Preceding gene: 158313163
Following gene: 158313165
Centisome position: 17.66
GC content: 67.78
Gene sequence:
>360_bases ATGGAACGCGGTGAAGTCTGGTGGGTGGACTTCGATGAGCGGCGGCCGGTCGTTCTGCTCTCGGGAGAGGAGCCCGGTGG GTTCCGGGCCATACAGGTCGTCGCTCCAGCGAACATCGAGATCAGCGGCGTGGCTGTCGAGGTGGCAGTAGGCGCCCCCG AGGGACTGCCCCTGGGCGGTGCCCTGCGAGTCGCGCTCCCACGCCCAGGCCTCATTCCTTGCACGTGGCTGGTCACCCTG ACCAGGGCAGACCTGATCGAGAAGGCCGGACGTCTGTCGCCCGCGAAGCTCGGCGAGCTCGACGAAGCTCTCCGTCTCAG TGGCCTGGAGCAGGTGGACGCTGCGGGAGCCGATGGTTGA
Upstream 100 bases:
>100_bases GTGATGGCCGTTGGTGAGGGAGGTCCGGGCGTGGCTGACGACCGATGCGTGTTCTGCGCGGTCGTGCGGGGTGCGCCCGC CGTCCCGTGTAGGAGGACAC
Downstream 100 bases:
>100_bases TGATCGTAGAGCCGTTGGCAGGTCGCTACGGGTCCATTGGTCGCGAAGGTCGTCGATCCAGCGACAGAGGGGCTCGACGG AACATCAGCCGACACACGCC
Product: transcriptional modulator of MazE/toxin, MazF
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MERGEVWWVDFDERRPVVLLSGEEPGGFRAIQVVAPANIEISGVAVEVAVGAPEGLPLGGALRVALPRPGLIPCTWLVTL TRADLIEKAGRLSPAKLGELDEALRLSGLEQVDAAGADG
Sequences:
>Translated_119_residues MERGEVWWVDFDERRPVVLLSGEEPGGFRAIQVVAPANIEISGVAVEVAVGAPEGLPLGGALRVALPRPGLIPCTWLVTL TRADLIEKAGRLSPAKLGELDEALRLSGLEQVDAAGADG >Mature_119_residues MERGEVWWVDFDERRPVVLLSGEEPGGFRAIQVVAPANIEISGVAVEVAVGAPEGLPLGGALRVALPRPGLIPCTWLVTL TRADLIEKAGRLSPAKLGELDEALRLSGLEQVDAAGADG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12491; Mature: 12491
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERGEVWWVDFDERRPVVLLSGEEPGGFRAIQVVAPANIEISGVAVEVAVGAPEGLPLGG CCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCC ALRVALPRPGLIPCTWLVTLTRADLIEKAGRLSPAKLGELDEALRLSGLEQVDAAGADG EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHCCCCCCC >Mature Secondary Structure MERGEVWWVDFDERRPVVLLSGEEPGGFRAIQVVAPANIEISGVAVEVAVGAPEGLPLGG CCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCC ALRVALPRPGLIPCTWLVTLTRADLIEKAGRLSPAKLGELDEALRLSGLEQVDAAGADG EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA